Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00542 ATGGCTACTGAACGTTTGACTCGTGTTCATAGTCTCAAGGAGAGACTTGATGAAACCTTAACTGCTAATAGGAATGAAATTTTGGCCCTTCTTTCAAGGCTTGAAGCAAAGGGAAAGGGAATTTTACAACACCATCAAGTGATTGCTGAGTTTGAAGAAATTCCTGAAGAGAGTAGACAGAAGCTGACTGATGGTGCATTTGGTGAAGTTTTGAGATCCACACAGGAAGCAATAGTTTTGCCACCATGGGTTGCACTTGCTGTTCGTCCAAGGCCAGGTATTTGGGAGTATCTGAGAGTGAATGTGCATGCTCTTGTTGTTGAAAATTTGCAACCTGCTGAGTTTCTCAAATTCAAGGAGGAACTTGTTGATGGAAGTGCTAATGGAAACTTTGTGCTTGAGTTGGACTTTGAACCATTTACTGCATCTTTCCCTCGTCCTACTCTCAACAAGTCAATTGGAAATGGTGTGCACTTCCTTAATCGCCATCTTTCTGCTAAACTCTTCCATGACAAGGAGAGTTTACATCCACTTTTGGAATTTCTCAGACTTCACAGCTACAAGGGAAAGACATTGATGTTGAATGACAGAATTCAAAACCCTGATTCTCTTCAACATGTTCTGAGGAAAGCTGAAGAGTATCTAAGCACAATTGATCCTGAAACACCATACTCAGAATTTGAACACAGGTTCCAGGAGATTGGTTTGGAGAGAGGTTGGGGAGACACCGCAGAGCGCGTCCTCGAGTCTATCCAACTTCTTTTGGATCTTCTAGAGGCTCCTGACCCTTGCACCCTTGAGTCTTTCCTTGATAGAATCCCAATGGTCTTTAATGTTGTCATCCTTTCTCCTCATGGTTACTTTGCTCAAGATGATGTCTTGGGATACCCTGATACTGGTGGCCAGGTTGTTTACATCTTGGATCAAGTTCGTGCCTTGGAGAGCGAGATGCTCAGTCGCATTAAGAAACAAGGCTTGGATATCATCCCTCGCATTCTCATTATCACTCGTCTTCTCCCTGATGCAGTCGGAACTACTTGTGGTCAACGGCTTGAAAAGGTCTATGGAACTGAGCATTGTCACATTCTTCGAGTTCCCTTTAGAGATGAGAAGGGAATTGTTCGCAAGTGGATCTCACGATTTGAAGTCTGGCCTTATCTAGAAACTTACACTGAGGATGTTGCTCATGAGCTTGCCAAAGAGTTGCAAAACAAACCAGATCTGATTGTTGGAAACTACAGTGATGGAAACATTGTTGCCTCTTTGTTGGCACATAAATTAGGTGTCACTCAGTGTACCATTGCTCATGCACTCGAGAAGACTAAGTACCCCGAATCCGACATTTACTGGAAAAAATTCGAAGAGAAGTATCACTTCTCCTGCCAATTTACCGCTGATCTTTTCGCAATGAACCACACAGATTTCATCATCACTAGTACCTTCCAAGAGATTGCTGGAAGCAAGGATAAGGTTGGACAGTATGAGAGTCACACTGCCTTTACTCTTCCAGGACTCTACCGCGTTGTGCACGGTATTGATGTCTTCGATCCAAAGTTCAACATTGTATCTCCAGGAGCTGACCAGACCATTTACTTCCCTTACACCGAAACTAGCCGCCGATTGACATCCTTCTACCCTGAAATCGAAGAGCTTCTTTACAGCTCAGTTGAGAATGAAGAGCACATATGTGTGCTGAAGGACCGCAACAAGCCGATTATCTTCACGATGGCAAGGTTGGACCGTGTGAAGAACATTACAGGACTTGTTGAGTGGTACGGCAAGAACGCCAAGCTTCGTGAGTTGGTGAACCTTGTTGTTGTTGCCGGAGACAGGAGGAAGGAGTCAAAGGACTTGGAAGAGATAGCTGAGATGAAGAAGATGTATGGCCTAATCGAGACCTACAAGTTGAATGGCCAATTCAGATGGATTTCCTCTCAGATGAACCGTGTCAGAAATGGAGAGCTGTACCGAGTGATTTGTGACACCAAGGGAGCTTTCGTGCAACCTGCTGTTTACGAAGCTTTTGGTTTGACAGTTGTTGAGGCCATGGCTACTGGATTGCCAACATTTGCAACTCTTAATGGTGGCCCTGCTGAGATCATTGTCCATGGCAAATCTGGATTCCACATTGATCCTTACCATGGCGACCGCGCTGCTGATCTCCTTGTTGAATTCTTTGAGAAGGTCAAGGTTGATCCATCTCACTGGGACAAGATCTCTCAAGGTGGTCTCCAACGTATTGAAGAGAAGTACACATGGACAATTTACTCTCAGAGGCTTCTTACACTCACTGGTGTCTATGGCTTCTGGAAGCATGTGTCTAACCTCGACCGTCTTGAGAGCCGCCGCTATCTTGAGATGTTCTATGCTCTCAAGTACCGCAAATTGGTAAGTTTTTATATTAGACGATGTAAGATTGAGTTAGACTCGAAAACTAATATAAATATTTTTCCATCAAGTTACTAA 2466 0.4404 MATERLTRVHSLKERLDETLTANRNEILALLSRLEAKGKGILQHHQVIAEFEEIPEESRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGIWEYLRVNVHALVVENLQPAEFLKFKEELVDGSANGNFVLELDFEPFTASFPRPTLNKSIGNGVHFLNRHLSAKLFHDKESLHPLLEFLRLHSYKGKTLMLNDRIQNPDSLQHVLRKAEEYLSTIDPETPYSEFEHRFQEIGLERGWGDTAERVLESIQLLLDLLEAPDPCTLESFLDRIPMVFNVVILSPHGYFAQDDVLGYPDTGGQVVYILDQVRALESEMLSRIKKQGLDIIPRILIITRLLPDAVGTTCGQRLEKVYGTEHCHILRVPFRDEKGIVRKWISRFEVWPYLETYTEDVAHELAKELQNKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFEEKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDKVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPYTETSRRLTSFYPEIEELLYSSVENEEHICVLKDRNKPIIFTMARLDRVKNITGLVEWYGKNAKLRELVNLVVVAGDRRKESKDLEEIAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAVYEAFGLTVVEAMATGLPTFATLNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKVDPSHWDKISQGGLQRIEEKYTWTIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLVSFYIRRCKIELDSKTNINIFPSSY 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00542 821 FunFam Sucrose synthase 146 275 - -
Mepo1g00542 821 NCBIfam sucrose synthase 24 797 IPR012820 GO:0005985|GO:0016157
Mepo1g00542 821 Gene3D - 146 275 - -
Mepo1g00542 821 Gene3D - 25 145 - -
Mepo1g00542 821 Gene3D Glycogen Phosphorylase B; 280 796 - -
Mepo1g00542 821 FunFam Sucrose synthase 280 559 - -
Mepo1g00542 821 Pfam Glycosyl transferases group 1 564 727 IPR001296 GO:0016757
Mepo1g00542 821 Pfam Sucrose synthase 8 553 IPR000368 GO:0005985|GO:0016157
Mepo1g00542 821 PANTHER - 7 798 IPR012820 GO:0005985|GO:0016157
Mepo1g00542 821 Gene3D Glycogen Phosphorylase B; 527 753 - -
Mepo1g00542 821 FunFam Sucrose synthase 11 145 - -
Mepo1g00542 821 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 295 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00542 Mepo-Chr1 5190215 5195524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00542 2 798 Glycosyltransferase AT3G43190 83.563 0.0 1401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00542 K00695 - gmx:547508 1512.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00542 1 5190215 5195524 Mepo1g00542 1 5190215 5195524 ECH
Mepo1g00542 1 5190215 5195524 Mepo6g01934 6 22572511 22578590 PCT