Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01734 ATGCCTGGGCACACAAGGCTATTTTTCATGCGCCTCAAGTGTGACAGTACACTTGGGGCAAATGGCACACACTTGGGGCATCTTAGCACCCTTTGGGCGCTTCGGTGCAATTTCATGCGCGGAATCGCCTGTTTCTTCGTTCTTTTAGTTTTGGAACCAACATCAATTAGTGATATTACTAACTTGATAAACTATTCAAACTCTCTCCCACAACCTTTTACCATATCCCCTAGAGGACAAGCACATTCGGTTTTAGGACAAGCCATGACACAAAATGGCATTGTTGTGAATATGACTCAACTCAATTGGTATAGAAATGGGTCTGGAATTGTAGTGTCTAATTGTGATGTGAAAAATCCATTAGGTTGTTATGTTGATGTGGGTGGAGAACAATTGTGGATTGATGTTTTGAATGCTACACTTAAGCATGGACTCACACTTCTCTCTTGGACTGATTACTTGTATTTGACTGTTGGTGGCACCCTCTCTAATGCTGGAATTGGTGGACAAACTATTAGATTTGTACCACAAATCTCCAATGTTCTTGAATTGGATGTTATTACATATGAGTTATTTCTTAGATCAAAAGGCCTTTGGGATGTTCCTCATCCTTGGTTAAACATGTTTATACCAAAGTCTAGAATCTCAGATTTTAATGAAGGTGTGATCAAGAGCATTATTCTTAACCAAAATCTTACTGCCGTATTGGTTTTAGTATACCCCTTGAACAGAAACAAGTGGGATGATAGGATGTCAACAGTTACACCAGATGAAGATGTGTTCTACATTGTAGCTCTTTTGCATTCTGCAAATTGGTTGGATGAAGTGAAGACATTTCAAGCTCAAAACTATGAGATATTACAATTTTGTAATGATACTGGTATTAAGATTAAAGAATATACTACGGGAAATAAAACACATCAAGAATGGATTGAACACTTTGGACCCAAATGGAAACTTTTTGAAGATTGA 972 0.3796 MPGHTRLFFMRLKCDSTLGANGTHLGHLSTLWALRCNFMRGIACFFVLLVLEPTSISDITNLINYSNSLPQPFTISPRGQAHSVLGQAMTQNGIVVNMTQLNWYRNGSGIVVSNCDVKNPLGCYVDVGGEQLWIDVLNATLKHGLTLLSWTDYLYLTVGGTLSNAGIGGQTIRFVPQISNVLELDVITYELFLRSKGLWDVPHPWLNMFIPKSRISDFNEGVIKSIILNQNLTAVLVLVYPLNRNKWDDRMSTVTPDEDVFYIVALLHSANWLDEVKTFQAQNYEILQFCNDTGIKIKEYTTGNKTHQEWIEHFGPKWKLFED 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01734 323 Pfam FAD binding domain 49 188 IPR006094 GO:0050660
Mepo6g01734 323 Gene3D - 98 188 IPR016169 -
Mepo6g01734 323 Gene3D - 49 97 IPR016167 -
Mepo6g01734 323 Gene3D - 301 322 IPR016167 -
Mepo6g01734 323 Gene3D - 190 300 IPR016170 -
Mepo6g01734 323 SUPERFAMILY FAD-binding/transporter-associated domain-like 41 189 IPR036318 GO:0050660
Mepo6g01734 323 SUPERFAMILY FAD-linked oxidases, C-terminal domain 189 322 IPR016164 GO:0003824|GO:0050660
Mepo6g01734 323 ProSiteProfiles PCMH-type FAD-binding domain profile. 39 242 IPR016166 GO:0071949
Mepo6g01734 323 PANTHER GULONOLACTONE OXIDASE 192 322 - -
Mepo6g01734 323 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 186 322 IPR015345 GO:0009690|GO:0019139|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01734 Mepo-Chr6 19498198 19501134 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01734 K00279 - ccaj:114916433 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01734 6 19498198 19501134 Mepo6g01734 6 19498198 19501134 ECH
Mepo1g00446 1 4275256 4282702 Mepo6g01734 6 19498198 19501134 PCT