Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00446 ATGACAAGGTATTTTCTACTTTCGAAAGCTTTGGTTATTCTACTATGTCTTAATATTGTAGTGCACACAAAACAAGCACAACTACAACCATGGTCACCACTAGATGCACCAAAAGAAATCCTCCAAATGCTTAGTCGTGACCCCGTGACCATTTCACTAGCCTCAACCGATTTTGGCCACATAATTCACCAAAACCCTTTTGCAATTTTTGCACCATCGTCAATTAATGACATATCTAAATTGATCAAATTCTCAAATTCACTTCCTATCCCTTTTACTATAGCAGCTAGAGGGCAAGGACATTCGGTTAATGGACAATCCATGACAAATGATGGGATTGTGATGAACATGACTGAATTGAATAATGAGCTTAGAAATAATGGGAATGGAATTGTTGTGTTTGATAAATATGTAGATGTTGGTGGTGGACATCTTTGGATTGATGTGTTGCATGCAAGCCTTGAAAAAGGACTTACACCACTTTCTTGGACTGATTATTTGTATTTATCGGTTGGTGGAACTCTCTCTAATGCTGGTATCAGTGGACAAACCTTCCGATTTGGTCCTCAAATTTCCAATGTTCATGAATTGGATGTTGTTACTGGGAAAGGAGACTTGGTGACTTGTTCTACAGAGAAGAACTCAGAATTATTTTATGCGGTTCTTGGAGGTCTAGGTCAATTTGGGATTATAACCCGGGCAAGAATAGCTCTTGGACCTGCACCTAAGAGGGTAAAGTGGCTCCGTTTACTTTACAACGACTTCTCTGCATTTTCTGGAGACCAAGAACATTTAATCTCATTGAATGGAATAGATGAAACTAATGCACCCAATTATGTAGAAGGTTTCTTGCTTCTAAATCAGCCACCATTGGACCTATCCTTTTTTCCAGAAATTGATCAACCTCGCATAACTTCCTTGGTAACTCAATATGGCATAATCTACATCATTGAGCTTGCCAAATATTACGATGAAAACTCTCAAGATCATGTTGATCAGGAAATTGAAATTTTGCTTCAGGGATTAAAGTTTGTCCGTACTTTTAAATTCGAAAAAGACGTGTCGTACGAAGAATTTCTAGATAGAGTTCATACTGATGAGCTAACACTAAGGGCACAAGGGCTTTGGGATATCCCACATCCTTGGTTAGACCTATTTGTTCCTGGTTCTAGAATGTCTGAATTTAATGAAGGTGTGTTCAAGGGTATTGTCCTTAAACAAAACATTACCGCAGGACTTGTAATAGTCTACCCAATGAACCGAACAAAGTGGGATGATAAGATGTCAGCAGTTACACCTAATGAAGAAATTTTCTACGTTGTGGACTTTTTGCGTGCAACTGAGTTTGATAATTTGGAGGCATATCAGTCTCAAAACCAACAAATATTGCAATTTTGTAAGGATGTTGGCATAGAGATCAAACATTATCTTCCCCTAAATAGAACACATGAAGAATGGGTGGAACAATATGGCCTCAAATGGAATGCTTTTGAGAAAAGAAAAAATCAATTTGATCCAAATAATATATTGTCACCTGGGCAAGGGATTTTCAACTAA 1557 0.3783 MTRYFLLSKALVILLCLNIVVHTKQAQLQPWSPLDAPKEILQMLSRDPVTISLASTDFGHIIHQNPFAIFAPSSINDISKLIKFSNSLPIPFTIAARGQGHSVNGQSMTNDGIVMNMTELNNELRNNGNGIVVFDKYVDVGGGHLWIDVLHASLEKGLTPLSWTDYLYLSVGGTLSNAGISGQTFRFGPQISNVHELDVVTGKGDLVTCSTEKNSELFYAVLGGLGQFGIITRARIALGPAPKRVKWLRLLYNDFSAFSGDQEHLISLNGIDETNAPNYVEGFLLLNQPPLDLSFFPEIDQPRITSLVTQYGIIYIIELAKYYDENSQDHVDQEIEILLQGLKFVRTFKFEKDVSYEEFLDRVHTDELTLRAQGLWDIPHPWLDLFVPGSRMSEFNEGVFKGIVLKQNITAGLVIVYPMNRTKWDDKMSAVTPNEEIFYVVDFLRATEFDNLEAYQSQNQQILQFCKDVGIEIKHYLPLNRTHEEWVEQYGLKWNAFEKRKNQFDPNNILSPGQGIFN 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00446 518 PANTHER GULONOLACTONE OXIDASE 18 518 - -
Mepo1g00446 518 ProSiteProfiles PCMH-type FAD-binding domain profile. 62 241 IPR016166 GO:0071949
Mepo1g00446 518 Pfam FAD binding domain 68 210 IPR006094 GO:0050660
Mepo1g00446 518 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 66 101 IPR006093 GO:0016491
Mepo1g00446 518 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 242 517 IPR015345 GO:0009690|GO:0019139|GO:0050660
Mepo1g00446 518 Gene3D - 48 517 IPR016167 -
Mepo1g00446 518 Gene3D - 244 476 IPR016170 -
Mepo1g00446 518 SUPERFAMILY FAD-linked oxidases, C-terminal domain 242 518 IPR016164 GO:0003824|GO:0050660
Mepo1g00446 518 SUPERFAMILY FAD-binding/transporter-associated domain-like 44 240 IPR036318 GO:0050660
Mepo1g00446 518 Gene3D - 117 243 IPR016169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00446 Mepo-Chr1 4275256 4282702 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00446 K00279 - gmx:100816815 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00446 1 4275256 4282702 Mepo6g01734 6 19498198 19501134 PCT