Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01696 ATGAAGATGGATCATATGACAACTAGGAAGAGGGAGACAAAAAAGAAGACGTGGCCGACGCCGACGGAGGAAGATAGGGTTCATGTTGTGGACTTGCATGGCATGTCCTTGGACTCACTTCCAAAACTTTCTCTTGATTTAGCTATTATTTCCAAGCTCAATTTGTCTAACAATAATCTCCAGAACATTCCGGAGTCATTAACGGCAAGATTATTAAACTTGGAGATGTTGGACGTGCACTCCAACCAGCTTAGATCCCTACCCAATTCCATTGGTTGTCTCTCTAAACTCAAAGTTTTGAATGTCTCTGGAAACTTCATCCAATCCCTCCCAGCAACCATTGAGAATTGCAGAGCATTAGAAGAACTGAATCTCAACTTCAACATGTTGAGCAAACTTCCAGACACAATAGGCTTTGAGCTGATAAAACTCAAGAAGCTTGCAGTCAACTCCAACAAGCTGGTGTGTCTTCCTAGCTCCACCTCTCACATGATGACTCTTATGGTTCTCGACGTACGTTTGAACTGCCTCAGGAGTCTCCCCGACGACCTTGAGAATCTCGTCAATCTTGAAACCCTGAATGTGAGTCAAAATTTCCGGTACTTGGAGTCATTGCCCTACTCCATAGGACTCCTCTTGTCCCTAGTTGAACTAGACATTAGCTACAACAATATCAAAACATTGCCCGACTCAATCGGGTGCCTCCAGAAGCTCCAAAAGCTAAGCGTGGAGGGAAACCCGCTCAGTTCGCCTCCACAGGAGGTGGTGGAGCAGGGATTGCATGTGGTAAAAGAGTACATGTGCAACAAAATGAACTCAAGCCATCATATCCCAACCAAAAAGAGATGGTGGATGGTGAAATGCGGGACCTTCAATGGAGACATGAAACGATCACAACATAAGGGTTTCCACAAGCTTCATTATCAGCCCATGAATGGTCTTGCTTCACCAGGCTTCATGGGGAGGTTGTCGCCTTCACCAGGCTTCATGGGTAGGTTGTCGCCACTCCGTCTTTTCTCACCGCGTCGTTCCTTAAGTTGA 1041 0.4582 MKMDHMTTRKRETKKKTWPTPTEEDRVHVVDLHGMSLDSLPKLSLDLAIISKLNLSNNNLQNIPESLTARLLNLEMLDVHSNQLRSLPNSIGCLSKLKVLNVSGNFIQSLPATIENCRALEELNLNFNMLSKLPDTIGFELIKLKKLAVNSNKLVCLPSSTSHMMTLMVLDVRLNCLRSLPDDLENLVNLETLNVSQNFRYLESLPYSIGLLLSLVELDISYNNIKTLPDSIGCLQKLQKLSVEGNPLSSPPQEVVEQGLHVVKEYMCNKMNSSHHIPTKKRWWMVKCGTFNGDMKRSQHKGFHKLHYQPMNGLASPGFMGRLSPSPGFMGRLSPLRLFSPRRSLS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01696 346 MobiDBLite consensus disorder prediction 1 21 - -
Mepo6g01696 346 Gene3D Ribonuclease Inhibitor 1 199 IPR032675 -
Mepo6g01696 346 Gene3D Ribonuclease Inhibitor 200 261 IPR032675 -
Mepo6g01696 346 Pfam Leucine rich repeat 143 198 IPR001611 GO:0005515
Mepo6g01696 346 Pfam Leucine rich repeat 212 248 IPR001611 GO:0005515
Mepo6g01696 346 Pfam Leucine rich repeat 51 105 IPR001611 GO:0005515
Mepo6g01696 346 SMART LRR_bac_2 212 231 - -
Mepo6g01696 346 SMART LRR_bac_2 117 136 - -
Mepo6g01696 346 SMART LRR_bac_2 47 66 - -
Mepo6g01696 346 SMART LRR_bac_2 71 90 - -
Mepo6g01696 346 SMART LRR_bac_2 94 113 - -
Mepo6g01696 346 SMART LRR_bac_2 141 160 - -
Mepo6g01696 346 SMART LRR_bac_2 187 208 - -
Mepo6g01696 346 SMART LRR_bac_2 235 254 - -
Mepo6g01696 346 ProSiteProfiles Leucine-rich repeat profile. 73 94 IPR001611 GO:0005515
Mepo6g01696 346 SUPERFAMILY L domain-like 26 253 - -
Mepo6g01696 346 PANTHER - 141 270 - -
Mepo6g01696 346 ProSiteProfiles Leucine-rich repeat profile. 214 235 IPR001611 GO:0005515
Mepo6g01696 346 SMART LRR_typ_2 71 93 IPR003591 -
Mepo6g01696 346 SMART LRR_typ_2 47 70 IPR003591 -
Mepo6g01696 346 SMART LRR_typ_2 212 234 IPR003591 -
Mepo6g01696 346 SMART LRR_typ_2 94 117 IPR003591 -
Mepo6g01696 346 SMART LRR_typ_2 118 140 IPR003591 -
Mepo6g01696 346 SMART LRR_typ_2 235 258 IPR003591 -
Mepo6g01696 346 SMART LRR_typ_2 141 164 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01696 Mepo-Chr6 19083053 19086734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01696 53 335 Receptor kinase-like Gene Family AT5G51350 30.537 8.58e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01696 - - lja:Lj6g3v1315120.1 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01696 6 19083053 19086734 Mepo6g01696 6 19083053 19086734 ECH
Mepo1g00419 1 4028658 4033047 Mepo6g01696 6 19083053 19086734 PCT