Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00419 ATGATGTACGAACAGCAACGGTTACAGCAGGCACCGGTGAGGAGCAAATATAATAATAATAATTCCAATTCGATAGAAGAGGAAGAGAGGCTTGAAATAGTTGATTTGAGTGGCATGTCATTGGAGTCTCTTCCCAATCCTTCTCTTAATTTAGCCACCATTTGTAAGTTGGATCTCTCCAACAACAATCTTCAGAATATTCCGGAGTCGTTAACAGCGAGACTGCTGAACATGGTGGTGTTGGACGTGCACTCAAACCAGCTTAGGTCCCTCCCAAACTCCATTGGCTGCCTCTCTAGGCTCAAGCTTTTGAATGTCTCCGGCAACCTCATCCATACTCTTCCCAAAACAATCGAGAATTGCAGAGCCTTAGAAGATTTGAATCTAAATTTCAACAAGTTGAGCCAACTACCAGACACAATAGGGTTTGAGCTAATAAACCTAAAGAAATTATCAGTCAACTCTAACAAGTTGATCTTCCTTCCACGCTCCACATCTCACCTCACATCTCTAAAGGTTTTAGACGCAAGACTTAACTGTCTTAGGTCTCTCCCAGAGGATCTTGAGAATCTCATCAACCTTGAAATCCTAAACGTGAGTCAGAACTTTCAATATTTGAATTCTATTCCATACTCTGTAGGACTTCTCTTGTCCCTCACTGAACTTGATGTTAGCTACAATAAGATCAAGTCATTGCCTGATTCCATTGGTTGTCTTAACAAGCTTCAAAAGTTGAGTGTGGAAGGGAACCCTCTGACTTCACCACCACCAGAAGTGGTAGAGAGGGGATTGCATATAGTGAAGGAGTACTTGTGCAACAAGATGAATGCTGGTCATCAAAGCCCAACAAAGAAGAAGTCTTGGGTTGGAAGGTTGGTGAAGTATGGAACATTCAATGTAAGAAGTGGAGCTCGTGAAGAACATGAGGCTTTCATCCTCCCCGAGTATACTCGTTCAATCGATGGACTTGCTTCTCCCCGTCATATGGGGATGTTTTCACCTCGTCGCCTCTTCTCCCCTCGTAGTTACTTCAGCAACTGA 1041 0.4313 MMYEQQRLQQAPVRSKYNNNNSNSIEEEERLEIVDLSGMSLESLPNPSLNLATICKLDLSNNNLQNIPESLTARLLNMVVLDVHSNQLRSLPNSIGCLSRLKLLNVSGNLIHTLPKTIENCRALEDLNLNFNKLSQLPDTIGFELINLKKLSVNSNKLIFLPRSTSHLTSLKVLDARLNCLRSLPEDLENLINLEILNVSQNFQYLNSIPYSVGLLLSLTELDVSYNKIKSLPDSIGCLNKLQKLSVEGNPLTSPPPEVVERGLHIVKEYLCNKMNAGHQSPTKKKSWVGRLVKYGTFNVRSGAREEHEAFILPEYTRSIDGLASPRHMGMFSPRRLFSPRSYFSN 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00419 346 PANTHER LEUCINE-RICH REPEAT-CONTAINING 29 138 - -
Mepo1g00419 346 ProSiteProfiles Leucine-rich repeat profile. 218 239 IPR001611 GO:0005515
Mepo1g00419 346 Gene3D Ribonuclease Inhibitor 144 271 IPR032675 -
Mepo1g00419 346 Gene3D Ribonuclease Inhibitor 2 143 IPR032675 -
Mepo1g00419 346 MobiDBLite consensus disorder prediction 1 22 - -
Mepo1g00419 346 SMART LRR_bac_2 75 94 - -
Mepo1g00419 346 SMART LRR_bac_2 168 187 - -
Mepo1g00419 346 SMART LRR_bac_2 216 235 - -
Mepo1g00419 346 SMART LRR_bac_2 145 164 - -
Mepo1g00419 346 SMART LRR_bac_2 51 70 - -
Mepo1g00419 346 SMART LRR_bac_2 98 117 - -
Mepo1g00419 346 SMART LRR_bac_2 121 140 - -
Mepo1g00419 346 ProSiteProfiles Leucine-rich repeat profile. 53 74 IPR001611 GO:0005515
Mepo1g00419 346 SMART LRR_typ_2 98 121 IPR003591 -
Mepo1g00419 346 SMART LRR_typ_2 239 262 IPR003591 -
Mepo1g00419 346 SMART LRR_typ_2 75 97 IPR003591 -
Mepo1g00419 346 SMART LRR_typ_2 216 238 IPR003591 -
Mepo1g00419 346 SMART LRR_typ_2 145 167 IPR003591 -
Mepo1g00419 346 SMART LRR_typ_2 51 74 IPR003591 -
Mepo1g00419 346 SMART LRR_typ_2 122 144 IPR003591 -
Mepo1g00419 346 SMART LRR_typ_2 168 191 IPR003591 -
Mepo1g00419 346 Pfam Leucine rich repeat 216 252 IPR001611 GO:0005515
Mepo1g00419 346 Pfam Leucine rich repeat 56 111 IPR001611 GO:0005515
Mepo1g00419 346 MobiDBLite consensus disorder prediction 1 24 - -
Mepo1g00419 346 SUPERFAMILY L domain-like 29 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00419 Mepo-Chr1 4028658 4033047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00419 52 247 Receptor kinase-like Gene Family AT4G13920 33.659 3.02e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00419 - - cam:101513208 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00419 1 4028658 4033047 Mepo1g00419 1 4028658 4033047 ECH
Mepo1g00419 1 4028658 4033047 Mepo6g01696 6 19083053 19086734 PCT