Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01679 ATGGCCACCACCGAACAACCCCAAAACGGCACCGCCACACTCCCACCGGAAAATCCCTCCGCCGACGAATCGACTCAGGAAATCGAGACGGTAACCGAAACTGGAACAGACACCGCGGCTACCGCCGTCACTCCGCCGGAGCAGAGATGGCCGGGTTGGCCTGGAGACTGTGTGTTCCGTTTGATTGTTCCTGTTGGGAAAGTCGGTGGAATCATTGGTCGTAAAGGAGAACTCATCAAGAAGCTTTGTGATGAAACGAAAGCTCGTGTTCGTGTTCTTGATGCCGATCTTGGTATTCCTGATCGAATTATACTTATATCAGGGAAGGAAGAACTTGAGGCAGCTATTTCCCCTGCAATGGATGCTGCTATAAGGATATTCAAACGTGTCTCTGGATTATCTGAGACTGACAGTGAGAATAAAGGACCTGCTGGGGTTACACATTGCTCCATCCGATTATTGGTGGCATCAACACAGGCTATCAGTTTGATCGGAAAGCAAGGAACAATAATCAGATCCATACAAGAGAGTTCTGGTGCTTCTGTTAGAGTACTGTCAGGAGATGAGGTGCAATATTTTGCTACTGCGGAAGAGAGGATTGTAGACCTGCAGGGAGAAGCCTTGATGGTTCTTAAAGCTCTGGAAGCCGTGATTGGCCATCTGAGGAAGTTTTTGGTTGATCACAGCATTCTTCCTGTATATGAGAAAACTTACAATGCGTCTCTCTCACAACAAGACCGTCAAGCAGAGACCTGGTCTGACAAGCCATTGCTGCATACCACTTCACAAACTAGCATGTTTTCTGATATTCCTTTTCCAACAAAAAGGGATTCTGTCTTCGCTGACCGTGAAAGTCATTTGGACTCATTGCTCTCATCCTCCACTATGTCTCTCTACGGGCAAGATTCTTCTCTTTGTGGTGCTCGTTCTTCATCTCTTAGTCGTGTTGGTGCTCCTATTGTTACTACAGTGATACAAACCATGCAAATACCGCTATCCTATGCGGAGGACATCATTGGCATTCAAGGAACTAATATAGATTATATTCGCCGCACTAGTGGAGCCATATTGACTGTGCAGGAGAGCAGGGTGCCTGATGAAATCGTTGTGGAAATAAAAGGAACCTCATCCCAGGTTCAAACAGCACAGCAATTGATACAGGAAGTTATAAGCAGTCACAGAGAACCTGTCACCAACAGCTACGGAAGGTTGGATGCAGGAAGAATGGATGTGGGTCTAAGGTCTTTATATTCCCAGTCTTCATACTCTCAGTTGGGCAATACATCACGTATCCCACCTTCTTCATTGTCATCACAACCATACACAGGTTATGGAGCATCTGGTTTAGGAGACTATAGTACTTTCAGGCTTTAG 1374 0.4622 MATTEQPQNGTATLPPENPSADESTQEIETVTETGTDTAATAVTPPEQRWPGWPGDCVFRLIVPVGKVGGIIGRKGELIKKLCDETKARVRVLDADLGIPDRIILISGKEELEAAISPAMDAAIRIFKRVSGLSETDSENKGPAGVTHCSIRLLVASTQAISLIGKQGTIIRSIQESSGASVRVLSGDEVQYFATAEERIVDLQGEALMVLKALEAVIGHLRKFLVDHSILPVYEKTYNASLSQQDRQAETWSDKPLLHTTSQTSMFSDIPFPTKRDSVFADRESHLDSLLSSSTMSLYGQDSSLCGARSSSLSRVGAPIVTTVIQTMQIPLSYAEDIIGIQGTNIDYIRRTSGAILTVQESRVPDEIVVEIKGTSSQVQTAQQLIQEVISSHREPVTNSYGRLDAGRMDVGLRSLYSQSSYSQLGNTSRIPPSSLSSQPYTGYGASGLGDYSTFRL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01679 457 ProSiteProfiles Type-1 KH domain profile. 56 123 - -
Mepo6g01679 457 Gene3D - 56 225 - -
Mepo6g01679 457 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 319 392 IPR036612 GO:0003723
Mepo6g01679 457 MobiDBLite consensus disorder prediction 1 49 - -
Mepo6g01679 457 ProSiteProfiles Type-1 KH domain profile. 148 217 - -
Mepo6g01679 457 SMART kh_6 55 128 IPR004087 GO:0003676
Mepo6g01679 457 SMART kh_6 147 222 IPR004087 GO:0003676
Mepo6g01679 457 SMART kh_6 322 391 IPR004087 GO:0003676
Mepo6g01679 457 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 46 418 - -
Mepo6g01679 457 MobiDBLite consensus disorder prediction 423 443 - -
Mepo6g01679 457 MobiDBLite consensus disorder prediction 1 43 - -
Mepo6g01679 457 Gene3D K Homology domain, type 1 322 396 IPR036612 GO:0003723
Mepo6g01679 457 CDD KH-I_PEPPER_rpt1_like 56 122 - -
Mepo6g01679 457 CDD KH-I_PEPPER_rpt2_like 152 222 - -
Mepo6g01679 457 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 48 111 IPR036612 GO:0003723
Mepo6g01679 457 ProSiteProfiles Type-1 KH domain profile. 323 386 - -
Mepo6g01679 457 Pfam KH domain 151 217 IPR004088 GO:0003723
Mepo6g01679 457 Pfam KH domain 326 388 IPR004088 GO:0003723
Mepo6g01679 457 Pfam KH domain 59 116 IPR004088 GO:0003723
Mepo6g01679 457 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 145 230 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01679 Mepo-Chr6 18787982 18794525 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01679 K21444 - gmx:100815466 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01679 6 18787982 18794525 Mepo6g01679 6 18787982 18794525 ECH
Mepo1g00401 1 3882309 3887029 Mepo6g01679 6 18787982 18794525 PCT