Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01672 ATGCATCAAGCTGTGGTGGATCCATTGTTGTCGCCCAATTTGAGCTCCGACTCTGTTTCTCGGAGATCGGCGTTGGAAAGAGGGAGATTTGGTGATCTTAGAGGGTTGCAGTGGCGTATAAATCTTGGGGTTTTGCCATCTTCTGTTTCAGCTACCATTGATGATCTTCGTCGTGTTACTGCTGATTGTAGAAGAAGGTATGCCAGTTTGAGAAGGCGCCTCCTTGTTGAAGCCCCTATTCCAAAGAATGGAAGGAATTCACCGACTCTTGAAATGGACAATCCACTTTCACAAAATCCAGATAGTACATGGAGTCGCTTTTTCCGCAATGCAGAGCTGGAAAGATTGGTTGATCAGGATTTGTCACGTTTATACCCAGAACATGGAAGTTATTTCCAAACACCAGGGTGCCAAGGCATGTTGAGACGGATTTTATTGCTATGGTGTCTAAAGCATCCAGACTGTGGTTATAGACAAGGAATGCATGAATTACTTGCTCCTTTTCTCTATGTTCTCCAAGTTGATTTGGAGCGCCTCTCAGAAGTTCGGAAGCTTTATGAAGACCATTTTACAGACAGATTCGATGGTCTTTTATGTCAAGAGAATGATCTTACATACAGCTTTGATTTTAGGAAATCTCCTGACATGATGGAGGATGAAATTGGCTCCCATGGAAATGCATCAAAAGCCAACAGTCTTGACGAACTTGAACCTGAGATACAGTCCATTGTATTACTAAGTGATGCATATGGAGCTGAAGGTGAACTCGGCATTGTATTATCAGAGAAATTCATGGAACATGATGCTTACTGTATGTTTGATGCTTTAATGAAGGGGGCCAATGGTTCAGTTGCAATGGCCGATTTCTTCGCTACCTCTCCTGTACCTGGCTCCCATACTGGCTTGCCTCCTGTCATTGAAGCTTCTATGGCATTGTATCATTTGTTATCTCTTGCTGATTCTTCTCTTCATAGCCATCTTTTGGACCTTGGGGTTGAGCCACAGTACTTCTATCTTCGATGGTTGCGAGTTTTATTTGGACGAGAATTTTCACTTGACAAACTATTAGTCATTTGGGATGAGATCTTTGCATCAGATAATAGCAAAGTGGAAAGTAGTGCGGATGAAAACATAGATTATGGGTTCAGGATCTTACATTCACCTCGAGGAGCATTTATCTCAGCTATTGCTGTAGCGATGTTACTTCATTTAAGATCTTCTCTACTTGCAACTGAAAACCCTACAACCTGTCTCCAAAGACTACTAAACTTCCCCGAAAACGTTACTATTGGAAAACTTCTAGAGAAGGCTAAAACCTTGCAGGATCTTGCTTTAAGTATTGATATTTCATCCCCATCACTTTTGCTTGTAGGGTCTCATTACCAAAGTAAAACAACATCTACGAGATCGGTTAGCCTTCCATCTGAATCTGTGTCTCCAAAAACTCCTCTGAATTTTATACCTGATAGTTACTGGGAAGAAAAGTGGAGAGTTGCTCAAAAAGCTGAAGAACGTAAGCAAGACGGTGTAGAAAATCAGGTTCCGACTCTGAAGAAAGGATGGACAGAAAAGATGAAATTACGTTTGAGAAGAGCAGAGTCTGACCCACCTCCATCAAGGGTTCTAAGTGGACAAAGGGGATCTAAGCCATCGTTTAGGCGCAGTTTGTTAGAAGATCTGCGTAAAGCACTTGGTGCTGAGGAAAACACAGAACACGAGCAGCATCATGATGATATCTTAAGCGAGCAGGATAATCTTTCTGAAGCAGTTGAAGAAGAGCAACAAGAAAGTAGCTGTAATAGCGACAACAATTCTGATGATAATTGTCCAAGTGGAAATTCTGGACATGAGGAAGAGTCTTCTGTATATTCTGACTCTGCTAGTCCTCCTAATGAGGCCAATGATGCCTCAGAGAAAAACAGTGCTGCATCTTTTTTATCCCTAGATGAATGCAACGAAGCTTTAGATACCAGTCCTATTGGTTCACCCCTTCCACTCTCTGAACCACCTGAGAACATACCTCCAACATCTGTGTGCAATAATAACGACCAAGGAAATAATCAAGGCAATGAAACTTCAGATACCAGTACAAGTGTTTCACCCTTTCCAATCTCTGATCCTTCTCATAACTTGCCTCAGACATCAGGGTGCAATAATGATGGTGAAGGAAGTTCAGCCACACAACCTAAAGAAAGAAAACAGAATAAATTCCAGTGGTTTTGGAAGTTTGGACGGAACACTGTTGAGGCTATCTCCGATAAAGTAGGAGGTGGTGCTTCCGAAGCTACAAAGTCTGCCAACAGTATTAGCAATCAAAGTAATTCACCGCCAGCCTCACCTGCTGCTAGTGGACATTGTAGTTCTGTTAGCGGCAGAGGAGATTCCGTTGACCAAAATGTTATGGGCACTTTGAAGAATATTGGGCAGTCTATGCTTGACCATATTCAGGTGATTGAATCTGTTTTCCAACAGGATCGAGGCCAGGGAGCCTCATCGGAGAACTTATCTAAAAATGTTCTTGTTGGAAAAGGGCAGGTTACTGCCATGCAAGCTCTAAAGGAGCTTCGGAAAATCAGCAATCTTTTGTCTGAGATGTGA 2598 0.4234 MHQAVVDPLLSPNLSSDSVSRRSALERGRFGDLRGLQWRINLGVLPSSVSATIDDLRRVTADCRRRYASLRRRLLVEAPIPKNGRNSPTLEMDNPLSQNPDSTWSRFFRNAELERLVDQDLSRLYPEHGSYFQTPGCQGMLRRILLLWCLKHPDCGYRQGMHELLAPFLYVLQVDLERLSEVRKLYEDHFTDRFDGLLCQENDLTYSFDFRKSPDMMEDEIGSHGNASKANSLDELEPEIQSIVLLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMKGANGSVAMADFFATSPVPGSHTGLPPVIEASMALYHLLSLADSSLHSHLLDLGVEPQYFYLRWLRVLFGREFSLDKLLVIWDEIFASDNSKVESSADENIDYGFRILHSPRGAFISAIAVAMLLHLRSSLLATENPTTCLQRLLNFPENVTIGKLLEKAKTLQDLALSIDISSPSLLLVGSHYQSKTTSTRSVSLPSESVSPKTPLNFIPDSYWEEKWRVAQKAEERKQDGVENQVPTLKKGWTEKMKLRLRRAESDPPPSRVLSGQRGSKPSFRRSLLEDLRKALGAEENTEHEQHHDDILSEQDNLSEAVEEEQQESSCNSDNNSDDNCPSGNSGHEEESSVYSDSASPPNEANDASEKNSAASFLSLDECNEALDTSPIGSPLPLSEPPENIPPTSVCNNNDQGNNQGNETSDTSTSVSPFPISDPSHNLPQTSGCNNDGEGSSATQPKERKQNKFQWFWKFGRNTVEAISDKVGGGASEATKSANSISNQSNSPPASPAASGHCSSVSGRGDSVDQNVMGTLKNIGQSMLDHIQVIESVFQQDRGQGASSENLSKNVLVGKGQVTAMQALKELRKISNLLSEM 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01672 865 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 20 437 - -
Mepo6g01672 865 MobiDBLite consensus disorder prediction 567 733 - -
Mepo6g01672 865 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 27 326 IPR035969 -
Mepo6g01672 865 MobiDBLite consensus disorder prediction 502 554 - -
Mepo6g01672 865 Coils Coil 576 596 - -
Mepo6g01672 865 MobiDBLite consensus disorder prediction 761 797 - -
Mepo6g01672 865 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 97 282 - -
Mepo6g01672 865 SMART tbc_4 25 388 IPR000195 -
Mepo6g01672 865 ProSiteProfiles TBC/rab GAP domain profile. 28 366 IPR000195 -
Mepo6g01672 865 Pfam Rab-GTPase-TBC domain 113 173 IPR000195 -
Mepo6g01672 865 Pfam Rab-GTPase-TBC domain 265 366 IPR000195 -
Mepo6g01672 865 Gene3D - 305 447 - -
Mepo6g01672 865 MobiDBLite consensus disorder prediction 757 797 - -
Mepo6g01672 865 MobiDBLite consensus disorder prediction 673 733 - -
Mepo6g01672 865 MobiDBLite consensus disorder prediction 567 583 - -
Mepo6g01672 865 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 302 441 IPR035969 -
Mepo6g01672 865 MobiDBLite consensus disorder prediction 592 647 - -
Mepo6g01672 865 MobiDBLite consensus disorder prediction 521 535 - -
Mepo6g01672 865 FunFam TBC1 domain family member 5 305 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01672 Mepo-Chr6 18715473 18720486 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01672 K18469 - gmx:100812967 1128.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01672 6 18715473 18720486 Mepo6g01672 6 18715473 18720486 ECH
Mepo1g00395 1 3836240 3841182 Mepo6g01672 6 18715473 18720486 PCT