Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00395 ATGCCACCGGCTCTGTTGGACCCACCATTGTCAAAATCATCGTCGGTTTCGTCTTTGATCTCCGGCACCATTTCTCAGGAACCGGTGCCGGAGAATCGGTTATTCGATGATCTTAGAGGTTTGCAGTGGCGTATAAATCTTGGGGTTTTTCCATCTTCTTCATCTTCAACTTCCGTTGATGATCTTCGTCGTGCCACCGCTAATTCTCGAAGAAGGTATGCGAGTTTGAGAGGGCGGCTCCTGGTTGATCCCCATGTTACAAAGGATGAAAGTAGTTCACCCAATCTTGTCATGGACAACCCGCTTTCACAAAATCCAAATAGTACATGGGGTCGCTTTTTTCACAATGCAGAGCTGGAGAGGATGGTGGATCAGGATTTATCACGTTTATACCCAGAACATGGCAACTATTTCCAGACAAAAGGATGCCAAGGCATATTGAGACGGATTTTATTATTATGGTGTCTTAGACACCCCGAGTGTGGTTATAGACAAGGAATGCACGAGTTGCTTGCTCCTTTGCTTTATGTTCTCCAAGTTGATGTGGAGCGCCTTGCAGAAGTTCGAAAACTTTATGAAGATCATTTTACAGACAGATTTGATGGTCTCTTTTGTCAAGAGAATGATCTTTCTTACAGCTTTGATTTTAAAAAATCTTCAGACTTAACGGATGACGAAATTGGTTCTCACGGAAAAGGAATGAAAATCAAGAGTCTTGATGAGCTTGATCCTAAGATACAGACAATTGTATTGCTAAGTGACGCGTATGGGGTTGAAGGTGAATTGGGCATTGTTTTATCTGAGAAATTTATTGAGCATGATGCTTACTGTATGTTTGAAGCTTTAATGAATGGGGCTCACGGTTCAGTTGCAATGGCTGATTTTTTCTCTTATTCTCCTGTTGCTGGGTCCCATACTGGTTTGCCACCTGTAATTGAAGCTTCTGCTGCATTGTATCATTTATTGTCGTATGTGGATTCATCTCTGTATAGCCATCTTGTTGATCTCGGGGTTGAACCACAGTACTTTGCTCTCCGCTGGTTGAGAGTTTTATTTGGACGGGAATTTTCACTTGACAGCCTCTTGATCGTCTGGGATGAAATATTTTTATCAGATAATAGCAAAATGGAAAAGCATGCAGAGGACAACACAGACACTTGTTTTAGGATCTTTCATTCATCTCGCGGAGCATTTATCTCAGCTATTGCTGTGGCAATGTTACTTCATATAAGATCTTCACTACTTGCAACGGAAAATCCTACGACCTGTCTCCAGAGATTATTAAGCTTCCCTGACAACACAAACATTAAAAAACTAATAGAGAAAGCTAAATCCTTGCAGACTCTTGCATTAAGTACTGAAATTTCATCCTCGACACCTGCGCTTGTAGAATATAACAACAAAGGTAAATCAGTTATTACAAGATCTGTTACCACCATTGCATGTGAATCAGGTTCACCAAAAACTCCTAAGAATTTATTACCTGATAATAGCTACTGGGAAGAAAAGTGGAGAGTTGTCCACAGTGCTGAAGAACTTAAACAAGATGGAGTAGAAAAGCAGGTTCCATCTCAGAAAAAGAGATGGACAGAAAAGGTAAAGTTAAGTTTAAAAAGAACAGTATCTGAACCATCTTCATCAACAATCAAGAGTGGTAAAAAGGAATCAAAGACATCTGTTAAGCGCAGTTTGTTAGAAGATCTATCCAAGGAACTTGGGTCAGAAGAAGATATAGAAAATCTCGGCTGTCATGAAACCTTATGCCAGCAGGATAATCATTCTGTAGCAGTTGAGATGGAGCAACAAGATGATGGCTCTGACGTAAGCAACAATTACGGTGCTGATGATAGATGTCTTAGTAGAAACATCGGCAGCGAGGAAAATTCATTCAACCTAGCTAGTCCTCCTAATGAGTTCAAAGATCATGAAAATGTCTCACAGAAAAGTAGTGTTGGGTCTAATTTATTCATTGATGAAATTAATGAAATTTCACATAACAGTCCCATCGATTCACCTCTTCCAATCTCTGATCATCCTGAGAACAACCTATCTCCGGTGGCAGGGCGCAATAATGAATCCACAGGAAATTCGGCCACACTTTCTAGTTCTAGGAATATAAAACTGAATAAATTCCAATGGCTTTGGAAATTTGGCCGTAATAATGGTGAGTTGATGTCTGAGAAAAGAGGACTTGCTTCTGAGGCTGTAAAACAAACCAACAAGTATAACGATCAAAGTAATACAGCTTCCTCTTCTACAGCTGGTGATCTTTGCAGTTCTGTTAATTTTAATGGAGATTCTGCTGACCAGAATGTGATGGGAACTTTAAAGAATATTGGGCAGTCCATGCTTGAGCATATTCAGGTGATTGAGTCTGCTTTCCAACAAGAGTGTGGTCAGGGAACTTCATTGGATAATAATACGTCTAAAAATGTTCTGGTTGGCAAAGGGCAGGGTACTGCCATGTCAGCTCTCAAGGAGCTTCGCAAAATTAGCAACCTTTTGTCTGAGATGTGA 2517 0.4044 MPPALLDPPLSKSSSVSSLISGTISQEPVPENRLFDDLRGLQWRINLGVFPSSSSSTSVDDLRRATANSRRRYASLRGRLLVDPHVTKDESSSPNLVMDNPLSQNPNSTWGRFFHNAELERMVDQDLSRLYPEHGNYFQTKGCQGILRRILLLWCLRHPECGYRQGMHELLAPLLYVLQVDVERLAEVRKLYEDHFTDRFDGLFCQENDLSYSFDFKKSSDLTDDEIGSHGKGMKIKSLDELDPKIQTIVLLSDAYGVEGELGIVLSEKFIEHDAYCMFEALMNGAHGSVAMADFFSYSPVAGSHTGLPPVIEASAALYHLLSYVDSSLYSHLVDLGVEPQYFALRWLRVLFGREFSLDSLLIVWDEIFLSDNSKMEKHAEDNTDTCFRIFHSSRGAFISAIAVAMLLHIRSSLLATENPTTCLQRLLSFPDNTNIKKLIEKAKSLQTLALSTEISSSTPALVEYNNKGKSVITRSVTTIACESGSPKTPKNLLPDNSYWEEKWRVVHSAEELKQDGVEKQVPSQKKRWTEKVKLSLKRTVSEPSSSTIKSGKKESKTSVKRSLLEDLSKELGSEEDIENLGCHETLCQQDNHSVAVEMEQQDDGSDVSNNYGADDRCLSRNIGSEENSFNLASPPNEFKDHENVSQKSSVGSNLFIDEINEISHNSPIDSPLPISDHPENNLSPVAGRNNESTGNSATLSSSRNIKLNKFQWLWKFGRNNGELMSEKRGLASEAVKQTNKYNDQSNTASSSTAGDLCSSVNFNGDSADQNVMGTLKNIGQSMLEHIQVIESAFQQECGQGTSLDNNTSKNVLVGKGQGTAMSALKELRKISNLLSEM 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00395 838 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 36 443 - -
Mepo1g00395 838 Gene3D - 311 455 - -
Mepo1g00395 838 ProSiteProfiles TBC/rab GAP domain profile. 33 372 IPR000195 -
Mepo1g00395 838 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 36 332 IPR035969 -
Mepo1g00395 838 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 307 447 IPR035969 -
Mepo1g00395 838 Pfam Rab-GTPase-TBC domain 120 180 IPR000195 -
Mepo1g00395 838 Pfam Rab-GTPase-TBC domain 272 373 IPR000195 -
Mepo1g00395 838 MobiDBLite consensus disorder prediction 540 562 - -
Mepo1g00395 838 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 107 289 - -
Mepo1g00395 838 FunFam TBC1 domain family member 5 311 455 - -
Mepo1g00395 838 MobiDBLite consensus disorder prediction 667 701 - -
Mepo1g00395 838 MobiDBLite consensus disorder prediction 1 23 - -
Mepo1g00395 838 SMART tbc_4 25 418 IPR000195 -
Mepo1g00395 838 MobiDBLite consensus disorder prediction 683 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00395 Mepo-Chr1 3836240 3841182 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00395 K18469 - gmx:100816501 1176.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00395 1 3836240 3841182 Mepo1g00395 1 3836240 3841182 ECH
Mepo1g00395 1 3836240 3841182 Mepo6g01672 6 18715473 18720486 PCT