Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00393 ATGCAACGTTTCTACCGCAAACTTGTTCAACCAACTTGTCAAGTTTTCATAAACCACCGTGGAATAGACACAAAGAAGAACGTTGCAGGGTTATTATACAAAGATTTAACAAGCATGGGAGTGAAATCTTTTTTGGACAGTATGAACATGAAACCAGGAGACAAACTATTTCATCATATTGACAAAGCAATTATTGGTTGTAAGGTTGGTGTTACGGTCTTCTCTCCTCTTTATTGCGACTCTTATTATTGTCTCCATGAACTCGCTCTTCTCATGGAGACAAAAAAAAGAGTCGTCCCTATCTTCTTCGACGTGAAACCGTCGCAGCTTATGGTCAAGGATGACGGAACTTGCTCTCCGAAACAGCTTCGAAGGTTTAGTTTAGCACTAGAAGAAGCCAAAAATACGGTGGGACTAACCTTTGATCCTGTCAATGGGGATTGGTCTGAACTACTAAAGGATACTACAGATGCAGTAATCATGAACTTGGAGGAGATAGAGACTAATAAGAAATGCCGTTATGTCTGTGGATTTCGCTACCGGAGCTGTTGCGAAACGATTACATTCACCGGCTCCGGTGATGGTCCTAGCGGTTATTGGAACCGTGGTATCTCAGCCTGCGCTGTATGTGACGGTGCGACTCCAATCTTTTGTAACAAACCTTTAGCGGTGATCGGTGGTGGAGATTCATTTATGGAAGAAGCAACGTTTTTGACAAAATACGATTTGAAGGTGGGGAGAATAAGAAGCGTGGTTGAGGCTTTTGGAGATGGGGAGAATATGAAGCTTGGGGGTTTGAAGGTGGAGAATGTGGTGACAAAAGAGGTTTTTGATTTGAAGGTTTCTGGGTTGTTCTTTGCAATTGCACATGAACCGACGAGATTTGATTGTTGTGTTCCTTCCATTGTTGCGTTCCTTTTCCAATTCTCCGTTCCTTTTCACAAATTTCAAGGTTTTGTTTGTGAGATTTGA 972 0.4208 MQRFYRKLVQPTCQVFINHRGIDTKKNVAGLLYKDLTSMGVKSFLDSMNMKPGDKLFHHIDKAIIGCKVGVTVFSPLYCDSYYCLHELALLMETKKRVVPIFFDVKPSQLMVKDDGTCSPKQLRRFSLALEEAKNTVGLTFDPVNGDWSELLKDTTDAVIMNLEEIETNKKCRYVCGFRYRSCCETITFTGSGDGPSGYWNRGISACAVCDGATPIFCNKPLAVIGGGDSFMEEATFLTKYDLKVGRIRSVVEAFGDGENMKLGGLKVENVVTKEVFDLKVSGLFFAIAHEPTRFDCCVPSIVAFLFQFSVPFHKFQGFVCEI 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00393 323 PANTHER COP1-INTERACTING PROTEIN-RELATED 13 165 - -
Mepo6g00393 323 PRINTS Pyridine nucleotide disulphide reductase class-II signature 200 212 - -
Mepo6g00393 323 PRINTS Pyridine nucleotide disulphide reductase class-II signature 217 241 - -
Mepo6g00393 323 SUPERFAMILY FAD/NAD(P)-binding domain 195 288 IPR036188 -
Mepo6g00393 323 Pfam TIR domain 14 110 IPR000157 GO:0007165
Mepo6g00393 323 Gene3D - 9 168 IPR035897 -
Mepo6g00393 323 SMART till_3 12 158 IPR000157 GO:0007165
Mepo6g00393 323 ProSiteProfiles TIR domain profile. 11 155 IPR000157 GO:0007165
Mepo6g00393 323 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-II active site. 207 229 IPR008255 GO:0016491
Mepo6g00393 323 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 138 IPR035897 -
Mepo6g00393 323 Gene3D - 186 249 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00393 Mepo-Chr6 4074411 4077184 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00393 8 170 Miscellaneous Gene Families AT1G57670 26.554 6.78e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00393 - - gmx:100798207 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00393 6 4074411 4077184 Mepo6g00393 6 4074411 4077184 ECH
Mepo2g03319 2 42856070 42856819 Mepo6g00393 6 4074411 4077184 PCT