Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03319 ATGCAACGTTTGTCAGCTACCTTGTACCGTAAAATGGTTCGTCCATCATGCGACGTGTTCATAAATCATCGAGGAATCGACACAAAGAAGAACATTGCGGGGTTGCTCTACGATCGTTTGGCGAAGATGGGAGTGAGATCATTTTTGGATAGCAAGAATATGAAACCTGGAGATAGGTTGTTTGATCATATTGATAGAGGAATTTTAGGTTGCAAAGTTGGTGTTGCTGTGTTTTCACCAACTTATTGTGACTCTTATTTTTGTCTCCATGAGCTTGCTCTTCTCATGGAATCAAAAAAGAGGGTTATCCCAATTTTCTATGATGTTAAACCTTCCCAGCTTGTTGTCAAGGACAATGGTACTTGTCCTGTTAAAGAGCTTCGAAGGTTTAGTGCTGCATTAGAGGAAGCTAAATTCACTGTTGGATTAACCTTTGATTCTTCCAATAGGGACTGGTCGGTGTTGTTAAAAGATGCTTCGGAAGCAGTGATTATGAACTTGTTGGAGTTAGAGGAAGAGCGTAAGCTCCTAAACAGGAAGCATTGA 546 0.4066 MQRLSATLYRKMVRPSCDVFINHRGIDTKKNIAGLLYDRLAKMGVRSFLDSKNMKPGDRLFDHIDRGILGCKVGVAVFSPTYCDSYFCLHELALLMESKKRVIPIFYDVKPSQLVVKDNGTCPVKELRRFSAALEEAKFTVGLTFDSSNRDWSVLLKDASEAVIMNLLELEEERKLLNRKH 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03319 181 PANTHER COP1-INTERACTING PROTEIN-RELATED 16 175 - -
Mepo2g03319 181 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 114 IPR035897 -
Mepo2g03319 181 Coils Coil 160 180 - -
Mepo2g03319 181 Pfam TIR domain 18 114 IPR000157 GO:0007165
Mepo2g03319 181 ProSiteProfiles TIR domain profile. 15 163 IPR000157 GO:0007165
Mepo2g03319 181 SMART till_3 16 149 IPR000157 GO:0007165
Mepo2g03319 181 Gene3D - 13 170 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03319 Mepo-Chr2 42856070 42856819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03319 14 146 Miscellaneous Gene Families AT1G57670 30.405 2.25e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03319 - - tpra:123914671 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03319 2 42856070 42856819 Mepo6g00393 6 4074411 4077184 PCT