Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04338 ATGGAAACACCATTGCTGACCAAAAGTTTGAAGGATGATTACTTGCCAGTGAAAAGTTTGAAGGATGTTAAACATGTTTTGTGGAGTGAGGCAATGAAGATATGGAAGATAGCACTTCCAGTGGCTTTGTGTTATTTGTTTCAATACCTCACGAACACTTCAACTTCCATCTATGCTGGCCATCTTGGAGATATTGAACTCTCTTCTTTCTCACTTTATCAAAGTGTCCTCAATTGCATCTATTCTTTGCTGTATGGTATGTCAACTGCAATAGCAACACTGTGTGGCCAAGCTTATGGTGCAGGACAATTTCAAAATGCTGGTATTTATGTTCAAAGATCATGTATTATACTCTTCACCACTTGTATACTCCTCTTGCCTATTAATATATATGCAACTCCAATCTTAAAATTTCTTGGCCAAGAACAAGAAATAGCTGACCTAGCTGGCAAATATGCTATTCTTATAATTCCAAGCATGTTTTCCATTGCTTTCAATTTGCCCATCCAGAAATTTCTTCAAGCACAAAGTGAAGTTAAAGTTATTATGTACATAGCAATTGTGATATTGCTAGTACAAAATGGTCTACTTTATATCTTCATCAGTGTATTTGATTGGGGAATAACTGGCTTAGCTATGGCAAGTAATATCACAGGATGGGGATTTGCTGTTGCTCAACTAATTTATGCCATTGGTTGGTGTAAAGAAGGATGGAATGGATTGTCTTGGATGGCATTTAGAGAATTATGGGAATTTACTAAGCTAAGTTTTGGTTCATCCGTAATGATTTGTTTAGAACAGTGGTATACTACAATCATTATCCTTCTTGCTGGTCACCTTGATAATCCTGTGATTGCTCTTGGTTCCTATTCAATTTGCCTTAATATTCAGGGTTGGAACGCCATGCTGCTTCTTGGACTAAGTACAGCACTAAGTGTTCGTGTCTCTAATACTCTTGGCATGTCCCATCCAAGAGCATCCAAGTACTCTTTCTTGGTGGCAATGTCTCAGTCTCTTCTCATTGGAACCATTTTCATGACTGTAATTTTCTTGAGTAAAGAAAAGTTTGCCTTCATCTTTACCAACAGTGATGATTTGATACATGCTGCAAGTGAATTAGCATACCTTCTTGGTATAACCATGGTTATCAACAGTGTTTCACAAACTATTTCAGGTGTGGTCATTGGATGTGGATGGCAAGTCATGGTTGGTTACATAAACTTGGCATGTTATTATATTGTTGGACTCCCTATTGGAATTTTCCTTGGATTCAACCAACATTTGGGGGTGAAGGGTCTTTGGGGAGGCACAATGTGCGGCAATATTCTTCAGATTTTAGTCCTCGTAGTCATTATATATAAGACCAACTGGACCAATGAGGTAGAGCAAACAGCTAATCGCATGAGAATTTGGAGCTCTAACAAACTTCAAAAGGACGTCATTTGA 1446 0.3797 METPLLTKSLKDDYLPVKSLKDVKHVLWSEAMKIWKIALPVALCYLFQYLTNTSTSIYAGHLGDIELSSFSLYQSVLNCIYSLLYGMSTAIATLCGQAYGAGQFQNAGIYVQRSCIILFTTCILLLPINIYATPILKFLGQEQEIADLAGKYAILIIPSMFSIAFNLPIQKFLQAQSEVKVIMYIAIVILLVQNGLLYIFISVFDWGITGLAMASNITGWGFAVAQLIYAIGWCKEGWNGLSWMAFRELWEFTKLSFGSSVMICLEQWYTTIIILLAGHLDNPVIALGSYSICLNIQGWNAMLLLGLSTALSVRVSNTLGMSHPRASKYSFLVAMSQSLLIGTIFMTVIFLSKEKFAFIFTNSDDLIHAASELAYLLGITMVINSVSQTISGVVIGCGWQVMVGYINLACYYIVGLPIGIFLGFNQHLGVKGLWGGTMCGNILQILVLVVIIYKTNWTNEVEQTANRMRIWSSNKLQKDVI 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04338 481 CDD MATE_eukaryotic 30 463 IPR045069 GO:0042910|GO:1990961
Mepo5g04338 481 Pfam MatE 260 419 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mepo5g04338 481 Pfam MatE 40 194 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mepo5g04338 481 NCBIfam MATE family efflux transporter 40 434 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mepo5g04338 481 PANTHER MULTIDRUG RESISTANCE PROTEIN 24 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04338 Mepo-Chr5 56397060 56409425 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04338 K03327 - gmx:100813527 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g04338 5 56397060 56409425 Mepo5g04338 5 56397060 56409425 ECH
Mepo5g04338 5 56397060 56409425 Mepo4g04213 4 51968490 51972062 PCT