Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04213 ATGGACTCTCACACTCCTCTTCTCAACACCACGGCGGCGACGGAGTTATTGGAGGTAGACGGTGGCGACTACTTGGAAGTGAAAGGGTTCAAACAAGCAAGGAAAGTATTCGCCATTGAAACAGTGAGAATATGGAAAATTGCATTGCCAATAGTTTTCAACATATTGTGTCAATATGGTGTTAACTCCATCACCAATATCTTCGTTGGTCATCTTGGTGACATTGAACTTTCTGCCATTTCTCTTATTAACTCTGTCATTGGCACTTTCGCTTTTGGCTTCATGTTAGGTATGGGGAGTGCGACCGAGACGCTCTGCGGTCAAGCTTTTGGAGCTGGACAGGTTCATATGCTTGGTGTTTACATGCAACGGTCGTGGATAATTTTATTTGTGACAAGTATTATCCTATTGCCAATATACATTTTCGCTGCTCCAATTTTGAAACTTCTTGGCCAACAGCAAGATATGGCTGATCTTGCTGGAAGTTTTGCTCTTTTAGTAATTCCTCAATTTCTCTCACTTTCCTTCAATTTTCCGACCCAAAAGTTCCTTCAGTCTCAAAGTAAGGTTAATGTCATTGCTTGGATTGGGTTAGTGGCTCTAATTGTGCATATTGGGTTGCTATGGCTCTTGATTTATGTATTAGATTTAGGCTTAACCGGTGCAGCGATTGCATTCAATGTCACGAGTTGGGGAATTACATTGGCTCAACTTGTTTATGTGGTGGTTTGGTGTAAGGATTGTTGGAATGGATTGTCGTGGTTGGCTATTAAGGATATATGGGCTTTTGTTCGGCTATCGGTTGCGTCGGCTGTTATGCTTTGCCTTGAAATTTGGTATATGATGAGCCTCATAGTTCTGGCTGGCCACCTTGATAATGCAGTGATTGCTGTTGATTCCATCTCTATATGTATGAATTTTAATGGATGGGAAGGCATGATCTTCATTGGAGTAAATGCAGCTATAAGTGTCAGAGTTTCCAACGAACTCGGACTTCGACATCCAAGAGCTGCTAAATACTCTGTTTACGTGACAGTCTTTCAATCTCTTTTCATGGGAATATTCTTCATGGGTGTAATTTTGGTAACTAAAGACTATTTTGCCATTGTTTTTACCAATAGTAAGACTTTGCAAGCGGCGGTTGCAGAACTGGGAAACCTCCTTGCTGTAACAATGGTTCTAAACAGCGTTCAACCAGTGATTTCGGGTGTTGCTGTTGGAGGTGGGTGGCAGGCCTTGGTGGCTTACATCAACGTAGGTTGTTATTACTTGTTTGGGCTTCCACTAGGCTACATTCTCGGTAATGTTGCAGAATTGGGGGTTAAGGTGGATAATACCTCTGCACGGGTGCAGCAATGGGGTGGACAAACCATAGAAGTTGACAGCAATGGGATGGACAAGCCATAG 1407 0.4264 MDSHTPLLNTTAATELLEVDGGDYLEVKGFKQARKVFAIETVRIWKIALPIVFNILCQYGVNSITNIFVGHLGDIELSAISLINSVIGTFAFGFMLGMGSATETLCGQAFGAGQVHMLGVYMQRSWIILFVTSIILLPIYIFAAPILKLLGQQQDMADLAGSFALLVIPQFLSLSFNFPTQKFLQSQSKVNVIAWIGLVALIVHIGLLWLLIYVLDLGLTGAAIAFNVTSWGITLAQLVYVVVWCKDCWNGLSWLAIKDIWAFVRLSVASAVMLCLEIWYMMSLIVLAGHLDNAVIAVDSISICMNFNGWEGMIFIGVNAAISVRVSNELGLRHPRAAKYSVYVTVFQSLFMGIFFMGVILVTKDYFAIVFTNSKTLQAAVAELGNLLAVTMVLNSVQPVISGVAVGGGWQALVAYINVGCYYLFGLPLGYILGNVAELGVKVDNTSARVQQWGGQTIEVDSNGMDKP 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04213 468 PANTHER MULTIDRUG RESISTANCE PROTEIN 33 437 - -
Mepo4g04213 468 NCBIfam MATE family efflux transporter 50 441 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mepo4g04213 468 CDD MATE_eukaryotic 40 442 IPR045069 GO:0042910|GO:1990961
Mepo4g04213 468 Pfam MatE 270 432 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mepo4g04213 468 Pfam MatE 50 209 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04213 Mepo-Chr4 51968490 51972062 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04213 K03327 - gmx:100799559 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04213 4 51968490 51972062 Mepo4g04213 4 51968490 51972062 ECH
Mepo5g04338 5 56397060 56409425 Mepo4g04213 4 51968490 51972062 PCT