Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01893 ATGAAGAAGTTGTACGGAGGAGTTCTGATTGCCTCATCTTTTACACTGTTTATGCTTATGATCCTGCGATATGGGGTCATGAAAAATCCTATTGGTGAAGGTTATTTGACTATACCTGTCTTAATTAATGGTACTAATCCTCTAGAATGGATTAATCCTGTGATTCCGCCTGCTATTCAAAATCCAGTTGCTACTTCTCAAGTTATTTCTGCGGACATTTTAGTATCTAGCCTCTTTGCCAGGAACAACTTTTCCAAACAAGAGCAGCAAACTCTGCAGACATGGAACCATTTGAAACACTTAATTGATCATGTTCAGGGTTTACCTAGTGCAACAGAAGCTATCAAGGAAGCTGCCAGTGCGTGGAATAGTCTTGTTTCCTCAGTTGAAGAGCAAAAGCAAGGTCATGGCAATGATAGTTCAAGAGCAAAAAAGAAACAGTGTCCCCATTTTCTTAATAAGATGAATTCTACTGAACTTGGTAATAGTAGTTACAGACTGCAATTACCTTGTGGTCTGACACAGGGTTCTTCGATTACTGTAATTGGTATTCCAAATGGTATTCTAGGTAATTTTCGGATAGATTTGACTGGTGAACCAATCCCTGGGGAGCCTGATCCCCCAGTTATCTTGCACTACAATGTTAGGCTTCATGGTGATAAAATCACCGAAGATCCAGTAATTGTCCAAAACACCTGGACAGTAGCTCATGATTGGGGTGAAGAGGAACGATGTCCATCCCCTGAATCTACAGAGGTTAAGAAAGTTGATGAGTTGGAGCAGTGCAATAAGATTGTTGGGAAGAACATTAGCCATCTTTACACGGGTGGCATGCATTCCCACACTTCAAGACAAATTTCAGCAACTGAAGAGCAATCAATTAAGAGAAAATACTTCCCTTTTAAGCAAGGATACCCTTTTGTTGCAACCATTAGAGTGGGATCAGAGGGAATCCAGATGACAGTTGATGGAAAACACATAACTTCATTTGCTTTTCGCGAAACTTTGGAGCCATGGCTTGTCAGTGAGATCAAAATTTCTGGGGACCTAAAACTAGAATCTATTCTTGCAAGTGGTCTGCCTACATCAGAGGATTCAGAGCATGTTGTTGATCTGGAATTATTGAAAGCAAGTCCTCTATCTGCACAGACCCCGTTGGATCTCTTCATTGGTGTTTTCTCTACAGCTAACAATTTTAAGCGACGGATGGCTGTTAGAAGAACCTGGATGCAGTACAATGCAGTTAGATCAAGTTCAACAGCTGTGCGCTTCTTTGTTGGTTTGCATAAAAGCCAAATAGTTAATGAAGAACTGTGGAAAGAAGCACAAACGTATGGAGACATACAGTTGATGCCGTTTGTTGACTACTACAGCCTCATCACCTGGAAATCTTTAGCAATATGTATTTTCGGGACACAGGTTGTTTCATCGAAGTTTGTCATGAAGACAGATGATGATGCATTTGTTCGTGTAGATATAGTGCTAGCCTCTTTGAAGAGGATCAATGTGTCTCATGGGTTACTATATGGACTCATCAATTCAGATTCCCAGCCTCATCGAAATCCTGATAGCAAATGGTACATCAGCCAAGAGGAATGGAGCGAAGGAACTTATCCTCCATGGGCACATGGTCCCGGTTATGTGGTTTCACATGACATAGCAAGGACAGTTTACAAGAAATACAAAGAGAATCATTTGAAGATGTTTAAATTAGAAGACGTTGCAATGGGAATCTGGATCGCAGACATGAAGAAGGAAGGTCTTGAAGTTCGATACGAGAATGAGGGCAGAGTTTATAATGAAGGTTGCAAGGATGGTTATGTGGTTGCCCATTATCAAGGTCCTAGGGAGTTGCTATGTTTGTGGCACAAACTTCAGGAGTTAAAACGCGCAACATGCTGTGGTGATAGGAGGTGA 1917 0.4121 MKKLYGGVLIASSFTLFMLMILRYGVMKNPIGEGYLTIPVLINGTNPLEWINPVIPPAIQNPVATSQVISADILVSSLFARNNFSKQEQQTLQTWNHLKHLIDHVQGLPSATEAIKEAASAWNSLVSSVEEQKQGHGNDSSRAKKKQCPHFLNKMNSTELGNSSYRLQLPCGLTQGSSITVIGIPNGILGNFRIDLTGEPIPGEPDPPVILHYNVRLHGDKITEDPVIVQNTWTVAHDWGEEERCPSPESTEVKKVDELEQCNKIVGKNISHLYTGGMHSHTSRQISATEEQSIKRKYFPFKQGYPFVATIRVGSEGIQMTVDGKHITSFAFRETLEPWLVSEIKISGDLKLESILASGLPTSEDSEHVVDLELLKASPLSAQTPLDLFIGVFSTANNFKRRMAVRRTWMQYNAVRSSSTAVRFFVGLHKSQIVNEELWKEAQTYGDIQLMPFVDYYSLITWKSLAICIFGTQVVSSKFVMKTDDDAFVRVDIVLASLKRINVSHGLLYGLINSDSQPHRNPDSKWYISQEEWSEGTYPPWAHGPGYVVSHDIARTVYKKYKENHLKMFKLEDVAMGIWIADMKKEGLEVRYENEGRVYNEGCKDGYVVAHYQGPRELLCLWHKLQELKRATCCGDRR 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01893 638 CDD GLECT 165 355 IPR001079 GO:0030246
Mepo5g01893 638 Gene3D - 156 357 - -
Mepo5g01893 638 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 339 591 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mepo5g01893 638 SMART galectin_3 165 358 IPR001079 GO:0030246
Mepo5g01893 638 Pfam Galactosyltransferase 400 584 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mepo5g01893 638 Gene3D - 379 601 - -
Mepo5g01893 638 SMART Gal_bind_lectin_2 169 357 IPR001079 GO:0030246
Mepo5g01893 638 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 165 358 IPR001079 GO:0030246
Mepo5g01893 638 MobiDBLite consensus disorder prediction 127 146 - -
Mepo5g01893 638 SUPERFAMILY Concanavalin A-like lectins/glucanases 165 358 IPR013320 -
Mepo5g01893 638 FunFam Beta-1,3-galactosyltransferase GALT1 379 608 - -
Mepo5g01893 638 Pfam Galactoside-binding lectin 165 356 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01893 Mepo-Chr5 20825143 20831423 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01893 1 634 Glycosyltransferase AT1G26810 63.084 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01893 K14413 - gmx:100782548 1135.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01893 5 20825143 20831423 Mepo5g01893 5 20825143 20831423 ECH
Mepo1g00635 1 6089594 6094414 Mepo5g01893 5 20825143 20831423 PCT