Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00635 ATGAAGAAGTGTTATGGAGGCCTTTTTATCATGGCTTTGGGTATGACGTTGTTTCTACTGCACAGTCTTAAAGGAATTCAGCCACAAAAGCAGTCAACAAAACAGTCAGCATACAGTTTTTTCAATAACCATTCACCACCAAATGATTCTATTAAAGAAAACAGCAATGTTGCAGTAGTAACCTCTTTCGATGCAGATCAGAGAATGGCACCGAAACCAACAAAACGGCCACATTTGATACATGTCACAGGGCTAGATGATCTGTATGACACGCAAAATTTATCTGAACGAGAGATGAATGTTGTACTTGTTTGGACACATTTACGTTTGTTGCTGTCGAGGTCAGATGCTTTGCCTGAAATAGCTCAAGGAGTTAAAGAGGCTTCTGTAGCTTGGAAAGAATTGATGTCGACTGTTGAAAATGACAACGCCTCGAAGATTAGTAAGATAGACAGCCTAGAAAATCAAAACTGTCCATTCTCTGTGACCAAACTTGGCAAGACAATGACAGATAGTGAAATCACACTGGATCTCCCTTGTGGTTTGATTGTAGATTCTTCTATTACACTGATTGGCATCCCTAATGGACAAAACAGTAGCTTTCAGATTGACCTAGCTGGACAAGAGCTAGAAGAGGAGCCAAATCCCCCAATTATTTTGCATTATAATGTGAGTCTTCCCGGAGAAAACATGACAGAGATGCCGTATATTGTTCAAAATACATGGACTAGTGATTTTGGGTGGGGTAAAGAGGAAAGATGCCCTGCTCATGGTTCTGCTAACATCCGCAAAGTTGATGAGCTTGTTCTCTGCAATGTACAAGCTGTCAGAAGTAACAACGAAGAGAATGTAAATGTCGGTCAACCTACTAGCGATATACCTTCTAATATTTCCTCAGAAAGTGCACATAGAACTGCTAATTTCCCTTTTTCTGAGGCTAATCCTTTCACTGCCACATTGTGGGTTGGGTCAGAAGGATTTCATATGACTGTAAATGGAAGGCATGAAACATCTTTTGCTTATAGGGAGAAACTTGAACCATGGTTAGTCAACACGATTAAAGTAGCAGGCAGTTTGAGTCTGTTATCAGTTCTGGCCAAAGGTTTACCCGTTACGGAAGATAATGATATAGTTGTTGATATTGAGAACCTGAAGGCTCCAACTATCCCTAGAAAAAGGCTTGTTTTATTGATCGGAGTATTCTCTACCGGAAATAACTTTGAGCGTCGAATGGCTCTGAGGAGGTCTTGGATGCAATATGAGGCTGTACGTTCTGGTGAAGTTGCTGTCAGATTTTTCATTGGACTTCATAAGAATAATAGAGTTAATCTTGAATTATGGAGGGAAGCTCAAGCATATGGAGATGTCCAGTTAATGCCTTTTGTTGATTATTATAGTTTGATTTCTCTGAAGACAATTGCAATTTGCATTCTGGGGACAAAAATCATTCCGTCTAAATACATTATGAAAACAGATGATGATGCTTTCATAAGGATTGATGAAGTGCTTTCCAGCCTCAAAGGGAAGCCATCTGAAGGCCTCTTGTACGGTCTAATATCTTCTAAATCATCTCCTGATAGGGATAAGGACAGCAAGTGGTACATCGGTGACGAGGAATGGCCACATGATACATACCCTCCATGGGCACATGGTCCTGGATATGTCATATCTCGCGACATAGCAAAATTCGTTGTCTTCGGCCACCAGGAAAGAAAACTCAAGTTCTTCAAATTAGAAGATGTTGCCATGGGCATATGGATTGAACAATTTAGGAATGGTGGAAAAGAAGTTCACTATGAGAATGATGAGAGGTTTTACAATGCTGGATGTGACTCAAATTATGTACTTGCCCATTATCAAAATCCAAGGATGGTGTTATGCCTTTGGGAGAAACTGCTGAAAGAACACAAACCAGAATGTTGTGAGTAG 1929 0.4023 MKKCYGGLFIMALGMTLFLLHSLKGIQPQKQSTKQSAYSFFNNHSPPNDSIKENSNVAVVTSFDADQRMAPKPTKRPHLIHVTGLDDLYDTQNLSEREMNVVLVWTHLRLLLSRSDALPEIAQGVKEASVAWKELMSTVENDNASKISKIDSLENQNCPFSVTKLGKTMTDSEITLDLPCGLIVDSSITLIGIPNGQNSSFQIDLAGQELEEEPNPPIILHYNVSLPGENMTEMPYIVQNTWTSDFGWGKEERCPAHGSANIRKVDELVLCNVQAVRSNNEENVNVGQPTSDIPSNISSESAHRTANFPFSEANPFTATLWVGSEGFHMTVNGRHETSFAYREKLEPWLVNTIKVAGSLSLLSVLAKGLPVTEDNDIVVDIENLKAPTIPRKRLVLLIGVFSTGNNFERRMALRRSWMQYEAVRSGEVAVRFFIGLHKNNRVNLELWREAQAYGDVQLMPFVDYYSLISLKTIAICILGTKIIPSKYIMKTDDDAFIRIDEVLSSLKGKPSEGLLYGLISSKSSPDRDKDSKWYIGDEEWPHDTYPPWAHGPGYVISRDIAKFVVFGHQERKLKFFKLEDVAMGIWIEQFRNGGKEVHYENDERFYNAGCDSNYVLAHYQNPRMVLCLWEKLLKEHKPECCE 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00635 642 Pfam Galactoside-binding lectin 175 365 IPR001079 GO:0030246
Mepo1g00635 642 SUPERFAMILY Concanavalin A-like lectins/glucanases 175 368 IPR013320 -
Mepo1g00635 642 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 333 594 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mepo1g00635 642 CDD GLECT 175 364 IPR001079 GO:0030246
Mepo1g00635 642 SMART Gal_bind_lectin_2 178 366 IPR001079 GO:0030246
Mepo1g00635 642 Gene3D - 391 613 - -
Mepo1g00635 642 Gene3D - 169 366 - -
Mepo1g00635 642 Coils Coil 136 156 - -
Mepo1g00635 642 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 174 367 IPR001079 GO:0030246
Mepo1g00635 642 Pfam Galactosyltransferase 408 590 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mepo1g00635 642 FunFam Beta-1,3-galactosyltransferase GALT1 388 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00635 Mepo-Chr1 6089594 6094414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00635 72 642 Glycosyltransferase AT3G06440 55.052 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00635 K20843 - gmx:100816729 1065.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00635 1 6089594 6094414 Mepo1g00635 1 6089594 6094414 ECH
Mepo1g00635 1 6089594 6094414 Mepo5g01893 5 20825143 20831423 PCT