Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01598 ATGGCGGCAGCAGCAGAAAACACCACACTTCCTGAGTCCACAGATTTTCCCTTGAAGAGGCAAAGAGAAGAAGAAGCTGAAGATCAATTACCTCACAACGGTGTCTCTCAAACTGTTCCAAAAGACCCTCAACCAAATGGTTTATCTTCTGTTATTCCTGGCTGGTTCTCTGAAATTAGCCCAATGTGGCCTGGGGAGGCTCACTCATTGAAGGTGGAAAAGATTCTGTTTCAAGGAAAATCTGATTATCAGGATGTTATGGTCTTCCAGTCAGCAACATATGGCAAGGTTCTTGTTTTGGACGGGGTCATTCAGCTCACAGAAAGGGATGAGTGTGCCTACCAAGAGATGATCACTCATCTTCCTCTTTGCTCAATTCCAAACCCCAAAAAGGTTTTGGTCATTGGTGGAGGAGATGGGGGAGTCCTGCGGGAAGTTTCACGCCATTCTTCAGTAGAAAAGATAGACATTTGTGAAATTGACAAGATGGTTGTCGATGTCTCCAAACAATTTTTCCCTCATATAGCAGTAGGTTTTGAGGACCCACGTGTGACACTTAATATCGGTGATGGAGTTGCATTTTTGAAGGCAGCTCCAGAAGGAACTTATGATGCAGTTATTGTGGATTCATCTGATCCCATTGGTCCTGCTCAAGAGCTTTTCGAAAAGCCCTTTTTTGAGTCGGTTGCAAGGGCTCTTCGTCCAGGAGGTGTTGTATGTACTCAGGCGGAAAGTATATGGCTTCATATGCATATCATCGAGGACATCGTAGTGAATTGTCGCCAAGTATTCAAAGGCTCTGTCAACTATGCTTGGACCACGGTTCCTACATACCCAAGTGGGATGATTGGTTTTATGCTTTGCTCAACTGAGGGGCCTTCGGTCGATTTCAAGCGTCCGGTGAATCCTATTGATGAGAATGATAGCCAGCATGCAGGAAGACCATTGAAATTTTACAACTCTGAGATCCATTCAGCAGCTTTCTGTTTGCCATCTTTCGCCAAGAGAGCAATTGCTTCTAAATCAAATTGA 1032 0.4448 MAAAAENTTLPESTDFPLKRQREEEAEDQLPHNGVSQTVPKDPQPNGLSSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQDVMVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPHIAVGFEDPRVTLNIGDGVAFLKAAPEGTYDAVIVDSSDPIGPAQELFEKPFFESVARALRPGGVVCTQAESIWLHMHIIEDIVVNCRQVFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPSVDFKRPVNPIDENDSQHAGRPLKFYNSEIHSAAFCLPSFAKRAIASKSN 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01598 343 MobiDBLite consensus disorder prediction 1 47 - -
Mepo5g01598 343 FunFam Spermidine synthase 1 46 105 - -
Mepo5g01598 343 Gene3D Spermidine synthase, tetramerisation domain 47 105 IPR037163 -
Mepo5g01598 343 PIRSF Spermidine_synth 44 343 IPR030668 GO:0006595
Mepo5g01598 343 FunFam Spermidine synthase 1 106 343 - -
Mepo5g01598 343 Hamap Polyamine aminopropyltransferase [speE]. 54 339 IPR001045 GO:0003824
Mepo5g01598 343 ProSitePatterns Polyamine biosynthesis (PABS) domain signature. 132 145 IPR030373 -
Mepo5g01598 343 MobiDBLite consensus disorder prediction 31 47 - -
Mepo5g01598 343 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 53 290 IPR030374 -
Mepo5g01598 343 NCBIfam spermidine synthase 55 333 IPR001045 GO:0003824
Mepo5g01598 343 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 51 338 IPR029063 -
Mepo5g01598 343 CDD AdoMet_MTases 131 242 - -
Mepo5g01598 343 Gene3D Vaccinia Virus protein VP39 106 343 IPR029063 -
Mepo5g01598 343 MobiDBLite consensus disorder prediction 16 30 - -
Mepo5g01598 343 Pfam Spermidine synthase tetramerisation domain 54 108 IPR035246 -
Mepo5g01598 343 PANTHER SPERMIDINE/SPERMINE SYNTHASE 46 341 IPR001045 GO:0003824
Mepo5g01598 343 Pfam Spermine/spermidine synthase domain 111 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01598 Mepo-Chr5 16911896 16917082 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01598 K00797 - gmx:100792107 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01598 5 16911896 16917082 Mepo5g01598 5 16911896 16917082 ECH
Mepo5g01598 5 16911896 16917082 Mepo1g02647 1 28017665 28024288 PCT