Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02647 ATGGCTGCTGCAGAGAGTATGGTGGAACTGGAATCCTCCATGAAGAGACAAAGAGATGATGAAGAAGAGAATAATGTGGTTTCTGTTTCAACAATGGATATTGAAGGTGGTGATGATAAGGACCCAAATGGTAATGGTGTTTCATCTGTGATTCCTGGGTGGTTTTCTGAAATTAGCCCAATGTGGCCTGGAGAAGCTCACTCCTTGAAGATAGAAAAGATTTTATTTCAAGGAAAGTCAGACTACCAGAAAGTCATGGTCTTCCAGTCATCAACATATGGCAAGGTTCTTGTTTTGGATGGAGTTATTCAGCTCACAGAAAGGGACGAATGTGCCTACCAAGAAATGATCACTCATCTTCCTCTTTGCTCTATTTCTGAGCCCAAAAAGGTTTTGGTTATTGGTGGAGGTGATGGAGGAGTCCTGCGAGAAGTAGCACGTCATTCTTCAATTGAAAAGATAGACATTTGTGAAATTGACAATATGGTCGTTGAAGTTTCCAAACAATTTTTCCCTGAAGTTGCAGTAGGGTTTAACGATCCACGTGTGACTCTTCGCATTGGTGATGGAGTTGCATTTTTGAAGGCAGTTCCAGAAGGAACTTATGATGCAGTTATAGTGGATTCATCTGACCCTATTGGTCCTGCTCAGGAGCTTTTCGAAAAGCCATTTTTTCAGTCAGTGGCAAGGGCTCTTCGTCCAGGAGGAGTTATGTGCACTCAGGCTGAAAGTATATGGCTTCATATGGATATAATTGAGGACATTGTTTCCAATTGTCGTCAGATTTTCAAAGGCTCTGTCAATTATGCTTGGACTACAGTTCCTACATATCCAAGTGGGATGATTGGTTTTATGCTTTGCTCAACTGAGGGACCTCTTGTTGATTTCAAGCATCCAGTGAATCCTATGGATGAAAACGAATGTCAGAAGTCAGTAAAACCACTCAAATTTTACAACTCTGAGATTCATACTGCAGCTTTTTGTTTGCCGTCGTTTGCGAAGAGGAAGATTGGTTCCAAAGAAAACTGA 1029 0.414 MAAAESMVELESSMKRQRDDEEENNVVSVSTMDIEGGDDKDPNGNGVSSVIPGWFSEISPMWPGEAHSLKIEKILFQGKSDYQKVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSISEPKKVLVIGGGDGGVLREVARHSSIEKIDICEIDNMVVEVSKQFFPEVAVGFNDPRVTLRIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFQSVARALRPGGVMCTQAESIWLHMDIIEDIVSNCRQIFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPLVDFKHPVNPMDENECQKSVKPLKFYNSEIHTAAFCLPSFAKRKIGSKEN 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02647 342 PANTHER SPERMIDINE/SPERMINE SYNTHASE 45 339 IPR001045 GO:0003824
Mepo1g02647 342 FunFam Spermidine synthase 1 105 342 - -
Mepo1g02647 342 ProSitePatterns Polyamine biosynthesis (PABS) domain signature. 131 144 IPR030373 -
Mepo1g02647 342 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 52 289 IPR030374 -
Mepo1g02647 342 Pfam Spermidine synthase tetramerisation domain 53 107 IPR035246 -
Mepo1g02647 342 NCBIfam spermidine synthase 54 332 IPR001045 GO:0003824
Mepo1g02647 342 PIRSF Spermidine_synth 43 342 IPR030668 GO:0006595
Mepo1g02647 342 MobiDBLite consensus disorder prediction 1 46 - -
Mepo1g02647 342 CDD AdoMet_MTases 130 241 - -
Mepo1g02647 342 Gene3D Vaccinia Virus protein VP39 105 342 IPR029063 -
Mepo1g02647 342 MobiDBLite consensus disorder prediction 11 25 - -
Mepo1g02647 342 Gene3D Spermidine synthase, tetramerisation domain 46 104 IPR037163 -
Mepo1g02647 342 FunFam Spermidine synthase 1 45 104 - -
Mepo1g02647 342 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 50 337 IPR029063 -
Mepo1g02647 342 Hamap Polyamine aminopropyltransferase [speE]. 53 338 IPR001045 GO:0003824
Mepo1g02647 342 Pfam Spermine/spermidine synthase domain 110 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02647 Mepo-Chr1 28017665 28024288 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02647 K00797 - gmx:100776863 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02647 1 28017665 28024288 Mepo1g02647 1 28017665 28024288 ECH
Mepo5g01598 5 16911896 16917082 Mepo1g02647 1 28017665 28024288 PCT