Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01071 ATGGCGACGAGAAAATCCACAAATCTCCTCAAACACCTCCTCACCTCACGCCACCACCTCACCCACCCCCGCACCGTAACCTATATGCCCCGCCCCGGAGACGGAACCCCCCGCAATGTAACCCTAATCCCCGGCGACGGAATCGGACCTCTCGTAACCGGTGCTGTTGAGCAAGTAATGGAAGCGATGCACGCGCCAGTGCACTTTGAGAAATTCGAAGTGCACGGCAACATGAAATCGATTCCATCTGAAGTGATGGAATCTATTAAGAAGAATAAGGTTTGTTTGAAAGGTGGATTAGCGACTCCGATGGGTGGTGGTGTTAGTTCGCTTAATTTGCAGCTGAGGAAGGAGCTTGATCTTTATGCTTCGCTTGTGAATTGCTTTAACCTTGAGGGATTGACTACTAGGCATGATAATGTTGATATTGTTGTTATTAGGGAGAATACTGAAGGGGAATATGCTGGTCTTGAACATGAGGTCGTTCCCGGCGTCGTTGAGAGTCTCAAGGTAATAACAAAGTTCTGTTCAGAGCGCATTGCTAAATATGCTTTCGAGTATGCGTATCTAAATAACAGAAAGAAGGTGACTGCTGTGCACAAAGCAAACATTATGAAGCTTGCAGATGGTTTATTCTTGGAATCTTGTCGAGAGGTTGCCACAAAGTATCATGGAATCAAGTATAATGAAATTATTGTAGATAACTGTTGCATGCAGCTTGTTTCAAAGCCTGAGCAGTTTGATGTCATGGTTACCCCCAATCTGTATGGAAATCTTGTTGCAAATACAGCGGCAGGCATTGCTGGAGGCACCGGTGTCATGCCGGGAGGTTGCAGTCTGGAGGCAACAGCGGCCGTTGTGGGGTAA 867 0.4694 MATRKSTNLLKHLLTSRHHLTHPRTVTYMPRPGDGTPRNVTLIPGDGIGPLVTGAVEQVMEAMHAPVHFEKFEVHGNMKSIPSEVMESIKKNKVCLKGGLATPMGGGVSSLNLQLRKELDLYASLVNCFNLEGLTTRHDNVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYHGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGCSLEATAAVVG 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01071 288 Pfam Isocitrate/isopropylmalate dehydrogenase 39 277 IPR024084 -
Mepo5g01071 288 SMART Iso_dh_2 39 286 IPR024084 -
Mepo5g01071 288 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 24 282 - -
Mepo5g01071 288 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 37 277 - -
Mepo5g01071 288 Gene3D Isopropylmalate Dehydrogenase 27 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01071 Mepo-Chr5 10605515 10610466 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01071 K00030 - gmx:100778831 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01071 5 10605515 10610466 Mepo5g01071 5 10605515 10610466 ECH
Mepo5g01071 5 10605515 10610466 Mepo1g02213 1 22775183 22780380 PCT