Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02213 ATGGCAAGAAGATCCATACCCCTCCTCAAACACCTCCTCTCAACCCGATCCCAATCCGAACCATTCACCATCTCAAAACGATGCGTAACCTACATGCACCGTCCCGGCGACGGAACCCCCCGTCCCGTAACCCTAATCCCCGGCGACGGAATCGGACCACTCGTAACCGGCGCCGTTGAGCAACTAATGGAAGCGATGCACGCGCCGGTTTACTTTGAGAAATTCGACGTACATGGTGACATGAAAGCTGTACCTACGGAAGTTCTTGAATCGATCCGTAAGAATAAGGTTTGTCTTAAAGGTGGATTGGTTACTCCTATGGGTGGTGGTGTTAGTTCGCTTAATGTTCAGTTGAGGAAAGAGCTTGATCTTTATGCTTCGCTTGTTAATTGTTTTAATCTTCCTGGGTTACCTACACGACATGATAACGTTGATATTGTAGTTATTAGGGAGAATACTGAAGGGGAGTATGCTGGTCTTGAACATGAGGTTGTTCCCGGTGTCGTCGAAAGTCTTAAGGTGATAACAAAGTTCTGTTCTGAGCGTATTGCTAAATATGCGTTCGAGTATGCTTACCTGAACAACAGAAAGCAAGTGACTGCTGTCCACAAAGCAAATATAATGAAGCTTGCAGATGGTTTGTTCTTGGAATCTTGTCGAGAGGTTGCCACAAAGTATCCTGGAATTAAATACAACGAAATTATTGTGGACAATTGTTGCATGCAGCTTGTTTCAAAGCCCGAGCAGTTTGACGTCATGGTTACCCCAAATCTGTATGGAAATCTAGTTGCAAATACTGCAGCTGGCATTGCTGGAGGCACTGGAGTCATGCCAGGAGGTAATGTTGGTGCTGAGCATGCTGTGTTTGAGCAGGGTGCTTCAGCAGGAAATGTTGGTAATGAGAAAGTAGCTGCACAAAAGACAGCTAACCCAGTGGCGCTTCTTCTCTCATCAGCTATGATGCTTAGGCATCTCCAGTTTCCTGCATTTGCTGACCGTTTGGAAAAAGCTGTTGAAAAAGTCATTCTTGAGGGCAAGTATCGGACAAAGGATCTTGGAGGGACAAGCACCACCCAAGAAGTTGTCGATGCAGTAATAGATGCTTTAGATTGA 1113 0.4573 MARRSIPLLKHLLSTRSQSEPFTISKRCVTYMHRPGDGTPRPVTLIPGDGIGPLVTGAVEQLMEAMHAPVYFEKFDVHGDMKAVPTEVLESIRKNKVCLKGGLVTPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHDNVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKQVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEHAVFEQGASAGNVGNEKVAAQKTANPVALLLSSAMMLRHLQFPAFADRLEKAVEKVILEGKYRTKDLGGTSTTQEVVDAVIDALD 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02213 370 Gene3D Isopropylmalate Dehydrogenase 26 369 - -
Mepo1g02213 370 Pfam Isocitrate/isopropylmalate dehydrogenase 43 365 IPR024084 -
Mepo1g02213 370 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 40 369 - -
Mepo1g02213 370 FunFam Isocitrate dehydrogenase [NAD] regulatory subunit 1 30 369 - -
Mepo1g02213 370 NCBIfam isocitrate dehydrogenase (NAD(+)) 39 368 IPR004434 GO:0006099
Mepo1g02213 370 SMART Iso_dh_2 42 365 IPR024084 -
Mepo1g02213 370 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 17 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02213 Mepo-Chr1 22775183 22780380 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02213 K00030 - gmx:100777867 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02213 1 22775183 22780380 Mepo1g02213 1 22775183 22780380 ECH
Mepo5g01071 5 10605515 10610466 Mepo1g02213 1 22775183 22780380 PCT