Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00541 ATGTACAGAGAAAGAGGAGGCGTTGGATCCAAAGCGGAGGTTGCATCCGTTGATCGGAAACGAATCAACGACGTTCTTGATAAGCAACTCGAACGATCCTCACCGTCCACTTCCAGAACAATCAACGGTGGTAAAGATAGGTCCTCTTCTTCCTCTCTTTTAACCGTTAAAGATCATAGGGACCCTCGCTCCAACACTCTCTCCAAAAATGCTTCCGATGAGGAATCTGAAACAGACAGTGAAGAGTCTGATGTTAGTGGTTCCGACGGTGATGATACCTCTTGGATCTCGTGGTTTTGCAATTTGAGGGGAAATGAATTCTTTTGTGAGGTTGACGATGATTACATCCAAGATGACTTCAATCTGTGTGGTTTGAGCAGTCAAGTGCCTTATTATGATTATGCTCTTGATTTAATTTTGGATGTTGAGTCCTCCCATGGCGACATGTTTACCGAGGAACAAAATGAGTTAATCGAATCAGCAGCGGAGATGCTTTATGGTATGATTCATGCCCGTTATATATTGACCAGCAAAGGACTGGCTGCCATGCTGGACAAGTACAAGAACTATGACTTCGGTAGATGCCCAAGAGTTTACTGCTCCGGACAACCTTGCCTTCCAGTTGGCCAGTCCGACATTCCTAGGTCTAGCACTGTGAAGATATATTGCCCGAGGTGTGAAGACATTTACTATCCTCGGTCCAAGTATCAAGGCAGTATCCTTATTCAATATCATTTAATGATGTCTATGTTTAGGTTGATTTTGCATGGACATGTCTCAAATTTACTTTGGTTCCTTTGTGCGCAAACCTCTTCCTTTGTCAATTTTTATTTTCATTTTTTATCTCCCAGCTTTGAACGGTCAATTAAGTAG 873 0.4273 MYRERGGVGSKAEVASVDRKRINDVLDKQLERSSPSTSRTINGGKDRSSSSSLLTVKDHRDPRSNTLSKNASDEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGMIHARYILTSKGLAAMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGSILIQYHLMMSMFRLILHGHVSNLLWFLCAQTSSFVNFYFHFLSPSFERSIK 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00541 290 MobiDBLite consensus disorder prediction 14 28 - -
Mepo5g00541 290 PRINTS Casein kinase II regulatory subunit family signature 111 125 IPR000704 GO:0005956|GO:0019887
Mepo5g00541 290 PRINTS Casein kinase II regulatory subunit family signature 166 187 IPR000704 GO:0005956|GO:0019887
Mepo5g00541 290 PRINTS Casein kinase II regulatory subunit family signature 191 212 IPR000704 GO:0005956|GO:0019887
Mepo5g00541 290 PRINTS Casein kinase II regulatory subunit family signature 94 110 IPR000704 GO:0005956|GO:0019887
Mepo5g00541 290 PRINTS Casein kinase II regulatory subunit family signature 213 234 IPR000704 GO:0005956|GO:0019887
Mepo5g00541 290 SMART CK_II_beta_2 94 252 IPR000704 GO:0005956|GO:0019887
Mepo5g00541 290 Pfam Casein kinase II regulatory subunit 94 239 IPR000704 GO:0005956|GO:0019887
Mepo5g00541 290 MobiDBLite consensus disorder prediction 1 90 - -
Mepo5g00541 290 FunFam Casein kinase II subunit beta 87 191 - -
Mepo5g00541 290 SUPERFAMILY Casein kinase II beta subunit 92 237 IPR035991 GO:0005956|GO:0019887
Mepo5g00541 290 FunFam Casein kinase II subunit beta 192 243 - -
Mepo5g00541 290 ProSitePatterns Casein kinase II regulatory subunit signature. 195 226 IPR000704 GO:0005956|GO:0019887
Mepo5g00541 290 Gene3D - 192 284 - -
Mepo5g00541 290 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 87 191 IPR016149 GO:0005956|GO:0019887
Mepo5g00541 290 MobiDBLite consensus disorder prediction 52 74 - -
Mepo5g00541 290 PANTHER CASEIN KINASE II SUBUNIT BETA 70 244 IPR000704 GO:0005956|GO:0019887
Mepo5g00541 290 MobiDBLite consensus disorder prediction 29 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00541 Mepo-Chr5 4718834 4722819 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00541 K03115 - gmx:100780095 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00541 5 4718834 4722819 Mepo5g00541 5 4718834 4722819 ECH
Mepo5g00541 5 4718834 4722819 Mepo1g01688 1 16642177 16646022 PCT