Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01688 ATGTACAAAGGTCGTGCTGGTTCTGCCTCCAAATCGGAGGATCGAAAGCGAATCAACGATGTTCTCGATAAGCAGCTTGAACGATCTTCTCCTTCAACTTCACGTCCCATCAATGGCAAAAGCAACAAAGAGAGAGAAACCAATACCATCAAGGATCCTCTTCTTCAACGATCCTCCAAAACTGCCAATATTTCTGAGGAGTCTGAAACAGACAGTGAAGAGTCGGATGTGAGTGGTTCTGATGGAGAGGACACATCTTGGATCTCATGGTTCTGCAATCTCAGAGGAAATGAGTTCTTTTGTGAGGTTGATGATGATTACATCCAAGATGACTTCAACCTTTGTGGATTGAGCAGCCAAGTGCCTTACTATGATTATGCTCTTGATTTGATTTTGGATGTTGAATCCTCTCATGGTGATATGTTCACAGAGGAACAAAACGAGTTAATTGAATCGGCAGCAGAGATGCTTTATGGTATGATTCATGCGCGATACATATTGACAAGCAAAGGAATGGCTGCTATGCTTGACAAGTACAAGAACTATGATTTTGGTAGATGCCCACGAGTTTACTGCTCTGGACAACCCTGTCTTCCAGTTGGTCAGTCGGACATTCCTAGGTCAAGTACTGTGAAAATATATTGCCCTAGGTGTGAAGATCTTTATTATCCTCGGTCCAAGTATCAAGGCAACATTGATGGAGCTTATTTTGGGACAACATTTCCACACCTCTTCTTGATGACATATGGACAACTGAAGCCGCAGAAACCAGCTCAGGGCTACGTTCCAAGAGTTTTTGGGTTCAAACTTCACAAGCCATGA 822 0.4307 MYKGRAGSASKSEDRKRINDVLDKQLERSSPSTSRPINGKSNKERETNTIKDPLLQRSSKTANISEESETDSEESDVSGSDGEDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGMIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPAQGYVPRVFGFKLHKP 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01688 273 FunFam Casein kinase II subunit beta 79 183 - -
Mepo1g01688 273 FunFam Casein kinase II subunit beta 184 258 - -
Mepo1g01688 273 PANTHER CASEIN KINASE II SUBUNIT BETA 65 272 IPR000704 GO:0005956|GO:0019887
Mepo1g01688 273 SUPERFAMILY Casein kinase II beta subunit 84 272 IPR035991 GO:0005956|GO:0019887
Mepo1g01688 273 Gene3D - 184 258 - -
Mepo1g01688 273 MobiDBLite consensus disorder prediction 1 82 - -
Mepo1g01688 273 ProSitePatterns Casein kinase II regulatory subunit signature. 187 218 IPR000704 GO:0005956|GO:0019887
Mepo1g01688 273 PRINTS Casein kinase II regulatory subunit family signature 205 226 IPR000704 GO:0005956|GO:0019887
Mepo1g01688 273 PRINTS Casein kinase II regulatory subunit family signature 183 204 IPR000704 GO:0005956|GO:0019887
Mepo1g01688 273 PRINTS Casein kinase II regulatory subunit family signature 103 117 IPR000704 GO:0005956|GO:0019887
Mepo1g01688 273 PRINTS Casein kinase II regulatory subunit family signature 158 179 IPR000704 GO:0005956|GO:0019887
Mepo1g01688 273 PRINTS Casein kinase II regulatory subunit family signature 233 250 IPR000704 GO:0005956|GO:0019887
Mepo1g01688 273 PRINTS Casein kinase II regulatory subunit family signature 86 102 IPR000704 GO:0005956|GO:0019887
Mepo1g01688 273 SMART CK_II_beta_2 86 269 IPR000704 GO:0005956|GO:0019887
Mepo1g01688 273 MobiDBLite consensus disorder prediction 8 24 - -
Mepo1g01688 273 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 79 183 IPR016149 GO:0005956|GO:0019887
Mepo1g01688 273 Pfam Casein kinase II regulatory subunit 86 269 IPR000704 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01688 Mepo-Chr1 16642177 16646022 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01688 K03115 - gmx:100793573 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01688 1 16642177 16646022 Mepo1g01688 1 16642177 16646022 ECH
Mepo5g00541 5 4718834 4722819 Mepo1g01688 1 16642177 16646022 PCT