Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00342 ATGGTGAATCGGCGCTTCACTCAGGTCGCTACAAGCGACGACGAAGAAGACGAAGCACCACCGCCACAACCCCCGCCACCTCAGCATTCAAAGCTTCGCAAACGAAAGAAGATGAAGCTTATAGACGAAGAAGATGATGAAGAATCCAACGACAATAGCAATAACGATAGTGATGAGAAGGAAGAAGAGAAAAAGGATTCACCTCAAACTCCAGAGGATGCAAAGCCGATTGGTGAACCCCTTAGGGTTTCGGGAAAAGGAAGAGGAAGGAAGAGACATTACGAATCGTTTGAGTTTGATGGAAATCAATATTCTCTCGAGGATCCTGTAATGCTTGTGCCTGAGGATAAAGAACAAAAACCATATGTTGCTATCATTAAGGACATTATTCAGTACTTTAGTGGCAGCATAATGGTGGCGGGACAGTGGTTTTATCGTCCTGAAGAAGCTGAAAAAAAAGGCGGAGGAAGCTGGAAATCGTGTGATACAAGGGAGCTTTTTTATAGTTTCCACCGAGATGAGGTTCCTGCAGAGTCCGTTATGCACAAGTGTGTGGTGCATTTTGTTCCCTTAAACAAACAGTTTCCGAAGCGTAAGCAACACCCTGGCTTCATAGTACAAAGGGTGTATGACACTTTGGAAAGGAAACTCTGGAAGCTGACTGATAAGGACTATGAGGACGTTAACCAGCAAGAAATTGATGAGCTTGTTCAGAAAACTATAAAACGCATCGGTGATCTACTCGACATTGAGCCTGAAGAAGCCCCTCCTGCTGTTCAGGAGGATGTGACGAAAAATAAAAGAAGCTTAAGGAGAAAGAGCATTTCTCCCATTGATGTTTCAAGGGAGGAGGAAGGAGTTTCTAAGAGTGACCAACATTCCAAACCTGAAACACCAGGGAGTTGTGTTAATAATGACTCAGAGCATCATCGCATATTAGTAAATTTCAATGCACTAACTGGAAACATTCATCGTGACAAATGGTTGGAGAGGTTGCTTCAACACATTCAGTACATGTGTAATAATGATGATAGTACAGAAAAGGAAAAAGGATCAGGAAATTCCGAGTCTGATGAAATCAAGAATAAAAACAATGATAGAACTTCAGAAATAGCAAATGACTCTCAGGACAAGGGTCAGAAGAGTTCCGAGTCTTTTGTGTGGCCAGATGCTTCTGTTTCAGCCATAGTTGCTCTTGAAAAAGCTTCCCATGAGACTTTTTCAACAGATTTTCAGAAGTATAACCAAAAGTTGCGGCAATTAGATTTTAATCTCAAGAACAATGCATTGCTAGCACGCCGTCTGTTAAATGGAGAGTTGAAACCTTCTAAAATTTTGAATATGACACCCATTGAATTAAAGGAGGGTTTGACTGCTGAGGAAAAAACCAAGAAGGAGCCTGATGAGAAACAACACATGCAAATGACAGATGCCCGCTGTTCAAGATGCACGGATTCTAAGGTGGGCTTGAGGGAGATTATCCATGCTGGACATGATGACCGTTATCAGCTGGAATGTGTTGCCTGTGGTAATTCCTGGTATGCCTCCCGTGATGAGGTGTCTGCACTGACCATAGATGCATTAGATTCAAAGAGAAGCATGAGCACAACACCATCTTCCACTGCAAAATTTGAAGATGTTCAGAAGAAGCTGGTGAGCCCCCGTGGCTCTGAAAATTCAGCTGATGACCTCTCTAAGAAAACAGGTGAACCATCTATGCCTGATTTGGCCACCCAGAAGTCATTTGGCAAGCCCAAGAAAGATGACAATGTTGAGGCCAAAAGACAGCCTGATAAGGAATGA 1803 0.4287 MVNRRFTQVATSDDEEDEAPPPQPPPPQHSKLRKRKKMKLIDEEDDEESNDNSNNDSDEKEEEKKDSPQTPEDAKPIGEPLRVSGKGRGRKRHYESFEFDGNQYSLEDPVMLVPEDKEQKPYVAIIKDIIQYFSGSIMVAGQWFYRPEEAEKKGGGSWKSCDTRELFYSFHRDEVPAESVMHKCVVHFVPLNKQFPKRKQHPGFIVQRVYDTLERKLWKLTDKDYEDVNQQEIDELVQKTIKRIGDLLDIEPEEAPPAVQEDVTKNKRSLRRKSISPIDVSREEEGVSKSDQHSKPETPGSCVNNDSEHHRILVNFNALTGNIHRDKWLERLLQHIQYMCNNDDSTEKEKGSGNSESDEIKNKNNDRTSEIANDSQDKGQKSSESFVWPDASVSAIVALEKASHETFSTDFQKYNQKLRQLDFNLKNNALLARRLLNGELKPSKILNMTPIELKEGLTAEEKTKKEPDEKQHMQMTDARCSRCTDSKVGLREIIHAGHDDRYQLECVACGNSWYASRDEVSALTIDALDSKRSMSTTPSSTAKFEDVQKKLVSPRGSENSADDLSKKTGEPSMPDLATQKSFGKPKKDDNVEAKRQPDKE 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00342 600 Gene3D - 27 203 IPR043151 -
Mepo5g00342 600 SMART mid_6 358 463 IPR003618 GO:0006351
Mepo5g00342 600 MobiDBLite consensus disorder prediction 258 292 - -
Mepo5g00342 600 CDD BAH_plant_3 84 230 - -
Mepo5g00342 600 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 593 - -
Mepo5g00342 600 Gene3D - 314 455 IPR036575 GO:0006351
Mepo5g00342 600 MobiDBLite consensus disorder prediction 57 72 - -
Mepo5g00342 600 MobiDBLite consensus disorder prediction 1 90 - -
Mepo5g00342 600 Pfam BAH domain 103 219 IPR001025 GO:0003682
Mepo5g00342 600 SMART BAH_4 102 221 IPR001025 GO:0003682
Mepo5g00342 600 SUPERFAMILY Elongation factor TFIIS domain 2 319 454 IPR036575 GO:0006351
Mepo5g00342 600 ProSiteProfiles BAH domain profile. 102 221 IPR001025 GO:0003682
Mepo5g00342 600 Pfam Transcription factor S-II (TFIIS), central domain 320 472 IPR003618 GO:0006351
Mepo5g00342 600 MobiDBLite consensus disorder prediction 344 374 - -
Mepo5g00342 600 MobiDBLite consensus disorder prediction 531 600 - -
Mepo5g00342 600 MobiDBLite consensus disorder prediction 581 600 - -
Mepo5g00342 600 ProSiteProfiles TFIIS central domain profile. 324 481 IPR003618 GO:0006351
Mepo5g00342 600 MobiDBLite consensus disorder prediction 531 546 - -
Mepo5g00342 600 MobiDBLite consensus disorder prediction 344 386 - -
Mepo5g00342 600 MobiDBLite consensus disorder prediction 252 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00342 Mepo-Chr5 2980004 2985426 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00342 - - cam:101495294 990.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00342 5 2980004 2985426 Mepo2g04622 2 54555199 54560534 PCT