Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04622 ATGGAAGCAATCAGCAGCTACGGTTCACCTTCGCCTTCTCACCACCGCAAAAGGAAGAGGCTGATGAAACTTCAAGAAGAAGAAGAAGATGAAGATGATTACGTTTACGAGAAGAAGGAAGAGGAGCCGCCATTGGAAGATGCTAAACCCATTGGCGAACCAGTTAGGGTTTCCAGAAGAGGAAAAAACAAAATCAATCATTTTCATTCCTTTGAATTTGATGGAAACCAGTACACACTTGAGGATACTGTGCTTCTTGAGCCTGATGGTAAAGATGAAAAGGCGTATGTGGCCATTATTAAGGACATTACACAATCCCCGAATGAAACCTTAATGATCACAGGGCAGTGGTTTTACCGTCCATATGAAGCAGAAAAAAAAGGAGGTGGTACCTGGCAATCAAATGAGACGAGAGAGTTATATTATAGTTTCCACCAAGACGATGTTCCTGCAGAATCTGTTAAGCATACATGTGTGGTGCATTTTGTTCCCATACACAAACAACTTCCAAATCGTAAGCAGCATCCCGGGTTCGTGGTGCAGAAAGTGTATGACATAGAAACAATGAAATTGTGGAATCTAACTGATAAGGACTACAAGGATGATAAACAAAAAGAAATTGATGAGCTTGTTCAGAAAACCATTCAACGTTTGGGTGAACTACCTGACATTGAGACTGATGAAGCTCCTGCTGGTCAGGAAGATCTGATGAAAAATAAAAGAGACTTCAAGAAAAAGAGTATTTCATCTCTTGATTTATCAAAGGAGAAGGAAGCATCTCGAAAGAGTGTCCAATCTCTGGAACCTGAAATACCAGGGAATCGTGTAGCTAATACCTCAGAGCATTATCGCATATTAGTGAAATTTAACGCACTAACAGGAGATGCCCATCGTGACAAATGTTTGGAGACGCTCCTTCAGAATGTTCAATACTTGTTTGATACCGATGACAACATGAAGAAAAAAGACAAAGGGAGTGACAATTCTGATGCTATCAACAATGGAGGAAATAGCAAAAGTTTAGAAATCGCAAATGAATGTAAAGGCAAAGTTCTGAAGAATTCCAAGCCTTTTGTCTGGCCAGATGTTGCTGTTCCAGCTGTAGTTGCTGTGGAGAAAGCTTCGCATGATGCATTTTCATCAGATTATCAGAAGTACAGACAAAAGCTACGACAGTTAGCATTTAATCTCAAGAACAATGCATTTCTGTTACGGCGTTTATTAAATGGAGAGCTAGAACCTTCAAAAATATTGAATATGACACCTACGGAGTTGAAGGAAGGTTTGACTGCTGAGGAATTACCCAAGAATGAGCCTGATGAACAACAACACATGCAGATGACAGATGCTGGTTGCAAACTTTGCACAGAGCGTAAAGTGGGTGTAAGGGATATTATTCGCGCAGGACTTGCTGACCGATATATGCTAGAATGTATCATCTGTGGTCATTCTTGGTCTGCCTCTTGTGATGCGGTGTCTGTGCTGACATTAGATGCATCAGATTCAAAAAGAAATGCAGGCACAGCCTCATGGGTCACTGCAAAATTTGAAGATGCTGAGAAGAAGAAGAAGCTAGTGGGTACTCATGAATCCGACGATTATGACTTCTTTATGCCGCCTGTATCCAGAAACCATTGA 1638 0.4096 MEAISSYGSPSPSHHRKRKRLMKLQEEEEDEDDYVYEKKEEEPPLEDAKPIGEPVRVSRRGKNKINHFHSFEFDGNQYTLEDTVLLEPDGKDEKAYVAIIKDITQSPNETLMITGQWFYRPYEAEKKGGGTWQSNETRELYYSFHQDDVPAESVKHTCVVHFVPIHKQLPNRKQHPGFVVQKVYDIETMKLWNLTDKDYKDDKQKEIDELVQKTIQRLGELPDIETDEAPAGQEDLMKNKRDFKKKSISSLDLSKEKEASRKSVQSLEPEIPGNRVANTSEHYRILVKFNALTGDAHRDKCLETLLQNVQYLFDTDDNMKKKDKGSDNSDAINNGGNSKSLEIANECKGKVLKNSKPFVWPDVAVPAVVAVEKASHDAFSSDYQKYRQKLRQLAFNLKNNAFLLRRLLNGELEPSKILNMTPTELKEGLTAEELPKNEPDEQQHMQMTDAGCKLCTERKVGVRDIIRAGLADRYMLECIICGHSWSASCDAVSVLTLDASDSKRNAGTASWVTAKFEDAEKKKKLVGTHESDDYDFFMPPVSRNH 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04622 545 ProSiteProfiles TFIIS central domain profile. 297 453 IPR003618 GO:0006351
Mepo2g04622 545 SMART mid_6 295 435 IPR003618 GO:0006351
Mepo2g04622 545 Gene3D - 46 213 IPR043151 -
Mepo2g04622 545 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 14 530 - -
Mepo2g04622 545 SMART BAH_4 76 195 IPR001025 GO:0003682
Mepo2g04622 545 Gene3D - 277 427 IPR036575 GO:0006351
Mepo2g04622 545 SUPERFAMILY Elongation factor TFIIS domain 2 292 426 IPR036575 GO:0006351
Mepo2g04622 545 MobiDBLite consensus disorder prediction 317 339 - -
Mepo2g04622 545 MobiDBLite consensus disorder prediction 1 51 - -
Mepo2g04622 545 ProSiteProfiles BAH domain profile. 76 195 IPR001025 GO:0003682
Mepo2g04622 545 MobiDBLite consensus disorder prediction 254 274 - -
Mepo2g04622 545 Pfam Transcription factor S-II (TFIIS), central domain 293 441 IPR003618 GO:0006351
Mepo2g04622 545 Pfam BAH domain 77 190 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04622 Mepo-Chr2 54555199 54560534 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04622 - - mtr:11437281 1004.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04622 2 54555199 54560534 Mepo2g04622 2 54555199 54560534 ECH
Mepo5g00342 5 2980004 2985426 Mepo2g04622 2 54555199 54560534 PCT