Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00270 ATGTCGGTTGCTGATGTTGCATTGAGACCGATTTTAAAAGAATCGGAAAAAAATTCACATTGTCATCACCGTCGTCGTTCAAGTGAATCCATTCTGATATACGTCACCGTAGACGGAGCAGTAACACCAATGCGTGTGTTAGAATCTGATTCAATTGCATCAGTGAAAATGAGGATTCAAACACGCAAAAATGTTTCATGGAGAAAGCAAAATCTGGTTTCTAATGGAAGAGAATTATCTCGCAACAACGCAGAGATGAAAGCGTACGGTGTAACTACTGGTAATGTTGTTCATTTGGTTCTTCGTCTTTCTGACATGATTTTCATTGTTGTGAGGACAATGTGTGGGAAGGAATTTGAGTTTCAAATTGATCGGCATAGGAACGTTGCGCATCTTAGGAATTGTATTAAAAGAAAGGGGAAAGGTTTTGTTGATCTTGTTGAGGAGGAACAAGAGTTTTTTTGCAGCGGCGAAAAGCTTGATGATAAGAGGATTTTTGATGATATTTGTAAGAATGATGATGATATTATTCATCTTATTGTTAAAAAATCGGCGAAAGTTAATGCTACTTTTGTTCATAATAAGGATTTAGAGCTTTCTGTTGTTGCAGATAATTTGAATTCTAATTCGAATCAGAATTTGAATAATCAGAAACAGGATGAGGTTGTTAAGTTTATAGAACAACCCTCTGGTTTTGATTTTTTGTTAGAACCGATTTTCGTGAACCCTAGGATCAATTTTTTTCCTTTCCTATGGGATATGATAGATGCAACTTTCAATGGTTTGAAAAAAGGAAATAAACCTGTGAGATCTTCTGAGGGAACAGGTGGGACTTACTTCATGCAAGATTTGAAAGGTGTGGAGTATGTTTCTGTTTTTAAGCCAATTGATGAGGAACCAATGGCGGTTAATAATCCGCGTGGATTGCCGGTATCAGTGAACGGTGAGGGATTGAAGAGAGGGACAAAGGTTGGAGAAGGAGCTGTGAGAGAAGTTGCGGCTTATATATTGGATCATCCGAAGGCTGGACCGCGTTTGGTGTCTGGTGAAGCGATTGGTTTTGCTGGTGTTCCGCCTACGGTTATGGTTCGGTGTTTACATGAAGCGTTTAATTACCCTGATGGTGGGGATTGTGGCTCTTTGAGGATGGATCATAAGGTGGGATCTTTGCAGAAGTTTATGAGTAATGATGGTAATTGTGAGGACATTGGACCTGGTGCTTTTCCTGTGCAAGAGGTGCATAAGATCAGTGTGCTTGATATAAGAATGGCGAATGCAGATAGGCATGCAGGGAATATATTGTTTAGAAAAGAGCTAAATGGTGAAACTCTGCTCATTCCCATTGATCATGGCTATTGTCTTCCTGAGAAATTTGAAGATTGCACATTTGATTGGCTTTACTGGCCTCAAGCACGTCAGCCATACTCTCCCGATACAGTTGATTACATATACTCTCTGGATGCTGAAAAGGACATAGAGCTTCTGAAATATTATGGTTGGGATGTTCCAGTTGAGAGTGCTAGAACACTCCGCATCTCCACAATGTTATTGAAGAAAGGGGTTGAGAGAGGTCTCACTCCCTATGCCATTGGAAGCATCATGTGTAGGGAAAATCTGAACAAAGAATCAGTAATTGAGGAGATTGTCTCTGAAGCCAAGAAATCATTGCTACCAGGCATGGAGGAATCTGTTTTTCTCGAATTTGTATCGCAGATCATGGATTCCCGCCTTGGCGAGCTTTCGAAATAG 1749 0.4019 MSVADVALRPILKESEKNSHCHHRRRSSESILIYVTVDGAVTPMRVLESDSIASVKMRIQTRKNVSWRKQNLVSNGRELSRNNAEMKAYGVTTGNVVHLVLRLSDMIFIVVRTMCGKEFEFQIDRHRNVAHLRNCIKRKGKGFVDLVEEEQEFFCSGEKLDDKRIFDDICKNDDDIIHLIVKKSAKVNATFVHNKDLELSVVADNLNSNSNQNLNNQKQDEVVKFIEQPSGFDFLLEPIFVNPRINFFPFLWDMIDATFNGLKKGNKPVRSSEGTGGTYFMQDLKGVEYVSVFKPIDEEPMAVNNPRGLPVSVNGEGLKRGTKVGEGAVREVAAYILDHPKAGPRLVSGEAIGFAGVPPTVMVRCLHEAFNYPDGGDCGSLRMDHKVGSLQKFMSNDGNCEDIGPGAFPVQEVHKISVLDIRMANADRHAGNILFRKELNGETLLIPIDHGYCLPEKFEDCTFDWLYWPQARQPYSPDTVDYIYSLDAEKDIELLKYYGWDVPVESARTLRISTMLLKKGVERGLTPYAIGSIMCRENLNKESVIEEIVSEAKKSLLPGMEESVFLEFVSQIMDSRLGELSK 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00270 582 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 40 555 IPR044571 -
Mepo5g00270 582 Pfam Phosphatidylinositol 3- and 4-kinase 274 529 IPR000403 -
Mepo5g00270 582 SUPERFAMILY Ubiquitin-like 82 183 IPR029071 -
Mepo5g00270 582 Gene3D - 13 100 - -
Mepo5g00270 582 ProSiteProfiles Ubiquitin domain profile. 107 186 IPR000626 GO:0005515
Mepo5g00270 582 Gene3D - 104 203 - -
Mepo5g00270 582 ProSiteProfiles Ubiquitin domain profile. 33 106 IPR000626 GO:0005515
Mepo5g00270 582 Pfam Ubiquitin family 33 103 IPR000626 GO:0005515
Mepo5g00270 582 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 265 564 IPR000403 -
Mepo5g00270 582 SMART ubq_7 31 102 IPR000626 GO:0005515
Mepo5g00270 582 SMART ubq_7 107 182 IPR000626 GO:0005515
Mepo5g00270 582 SUPERFAMILY Ubiquitin-like 15 104 IPR029071 -
Mepo5g00270 582 CDD Ubl_ubiquitin_like 109 180 - -
Mepo5g00270 582 SUPERFAMILY Protein kinase-like (PK-like) 418 580 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00270 Mepo-Chr5 2376888 2380146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00270 1 581 Acyl Lipid Metabolism Gene Families AT5G24240 52.211 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00270 - - gmx:100787492 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00270 5 2376888 2380146 Mepo5g00270 5 2376888 2380146 ECH
Mepo5g00270 5 2376888 2380146 Mepo1g03915 1 45473009 45476197 ECH
Mepo5g00270 5 2376888 2380146 Mepo2g04736 2 55640838 55643816 PCT