Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00034 ATGAAGTTTTTGTGGCGGATGTCAGTGTTTATGTTAGTTGGGATTATGTTGACTGGGATGTCAACGGCGAGATTCGTGGTGGAGAAGAACAGTTTGTCGGTGACTTCACCTGATAAAATCAAAGGGAAACATGACAGTGCGATCGGTAACTTTGGTATTCCTCAATACGGTGGTAGCATGGCTGGTAATGTTGTTTATCCTAAAGATAACAATAAGGGTTGTAAAGACTTCGATGATTCTTCATCTTTCAAATCCAAACCCGGTGCTCTTCCTACCATCCTTCTCCTTGATCGTGGAAATTGTTTCTTTGCTTTGAAGGTTTGGAATGCTCAGAAGGCTGGAGCTTCTGCGGTTCTCGTTGCCGATGATATTGAGGAGCCCTTGATTACTATGGACACACCCGAAGAGGATGTTTCATCTGCTAAATATATTGAGAATATTACAATACCCTCTGCTCTTATTGGAAAAACTTTTGGTCAGAAGTTGAAGGATGCCATTAGTGGTGGTGATATGGTCAATGTTAATCTTGACTGGAGAGAGGCTGTTCCTCATCCTGATGATCGTGTCGAGTACGAGTTGTGGACCAATAGTAACGATGAGTGTGGAGTTAAATGTGATATGTTGATTGAGTTTTTGAAGGATTTCAAGGGTGCAGCGCAGATCTTAGAGAAAGGAGGTTATACTCAGTTTACACCCCATTATATAACATGGTACTGTCCTCATGCGTTTACATTGAGTAAACAGTGTAAGTCCCAATGCATAAACCATGGAAGATATTGCGCTCCGGATCCTGAGCAGGACTTCAGCACAGGCTATGATGGGAAAGATGTGGTTGTTGAAAATTTGAGGCAGCTATGTGTTTACAAGGTGGCAAAAGAAACCGAAAAGCCTTGGGTGTGGTGGGACTATGTCACTGATTTTCAAATTAGATGCCCGATGAAGGAGAAAAAGTACAACAAGGAATGTGCCAATGCCGTCATTAAATCTCTTGGTCTTGACATCTCAAAGATTGACAAGTGCATGGGAGATCCTGATGCCGATACTGAAAATTCCATTTTGAAAGAAGAGCAAGATGCCCAAATTGGGAAGGGATCACGCGGTGATGTTACCATATTGCCTACTCTTGTTGTCAATAACAGACAATATCGTGGTAAACTGGAGAAAGGTGCCGTTTTAAAGGCTATTTGTTCTGGATTTGAGGAAACTACTGACCCAGCTGTTTGTTTGAGCAACGATGTGGAAACAAATGAGTGCTTGACAAACAACGGTGGTTGCTGGCAGGATAAAGCAGCTAATATCACTGCATGCAAGGATACATTCCGTGGGCGAGTATGTGAATGCCCCTTGGTTGATGGTGTGCAATTCAAAGGAGACGGTTATACAACCTGTGAAGTCGGTGGACCTGGGCGTTGCAAGATCAACAATGGAGGATGTTGGCATGATGCCCGCAATGGACATGCATTTTCTGCTTGTTTGGATGATGGAGGAGTTAAATGCCAGTGTCCTACAGGTTTTAAAGGTGACGGTGTAAAAATTTGTGAAGACATTGATGAATGCAAAGAGAAGAAAGCTTGTCAGTGCCCTGAATGTAGCTGCAAAAACACTTGGGGCAGCTACGACTGCAGTTGTAGTGGAGATCTTCTGTATATCAAGGACCATGATACCTGTATAAGTAAAACTGCCAGTCAGGCAAAATCCACTTGGGCTGCTTTTTGGGTCATTTTGATTGGCTTGGGTATGATTGCTGGAGGGGGATTCCTCGTGTACAAATATAGAATTAGGCAATACATGGATTCTGAAATCAGAGCAATCATGGCACAATATATGCCCTTGGACAGCCAAGCAGAAGTTCCAAATCACGTCAATCATCAAAGAGCTTGA 1881 0.4296 MKFLWRMSVFMLVGIMLTGMSTARFVVEKNSLSVTSPDKIKGKHDSAIGNFGIPQYGGSMAGNVVYPKDNNKGCKDFDDSSSFKSKPGALPTILLLDRGNCFFALKVWNAQKAGASAVLVADDIEEPLITMDTPEEDVSSAKYIENITIPSALIGKTFGQKLKDAISGGDMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLIEFLKDFKGAAQILEKGGYTQFTPHYITWYCPHAFTLSKQCKSQCINHGRYCAPDPEQDFSTGYDGKDVVVENLRQLCVYKVAKETEKPWVWWDYVTDFQIRCPMKEKKYNKECANAVIKSLGLDISKIDKCMGDPDADTENSILKEEQDAQIGKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAICSGFEETTDPAVCLSNDVETNECLTNNGGCWQDKAANITACKDTFRGRVCECPLVDGVQFKGDGYTTCEVGGPGRCKINNGGCWHDARNGHAFSACLDDGGVKCQCPTGFKGDGVKICEDIDECKEKKACQCPECSCKNTWGSYDCSCSGDLLYIKDHDTCISKTASQAKSTWAAFWVILIGLGMIAGGGFLVYKYRIRQYMDSEIRAIMAQYMPLDSQAEVPNHVNHQRA 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00034 626 Gene3D Glutaredoxin 237 398 - -
Mepo5g00034 626 SUPERFAMILY PA domain 44 169 IPR046450 -
Mepo5g00034 626 ProSitePatterns Calcium-binding EGF-like domain signature. 515 541 IPR018097 GO:0005509
Mepo5g00034 626 FunFam vacuolar-sorting receptor 1 408 464 - -
Mepo5g00034 626 Gene3D Laminin 520 557 - -
Mepo5g00034 626 Gene3D - 22 185 - -
Mepo5g00034 626 PANTHER PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 9 615 - -
Mepo5g00034 626 Pfam PA domain 61 162 IPR003137 -
Mepo5g00034 626 Gene3D Laminin 469 519 - -
Mepo5g00034 626 CDD PA_VSR 50 176 - -
Mepo5g00034 626 FunFam Vacuolar-sorting receptor 1 22 185 - -
Mepo5g00034 626 CDD EGF_CA 515 543 - -
Mepo5g00034 626 SMART egfca_6 515 557 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00034 Mepo-Chr5 354959 359036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00034 23 626 Miscellaneous Gene Families AT2G14740 84.793 0.0 1101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00034 - - gmx:100820115 1169.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00034 5 354959 359036 Mepo5g00034 5 354959 359036 ECH
Mepo5g00034 5 354959 359036 Mepo4g04525 4 54969958 54976603 PCT