Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04525 ATGAAAATTCGAAGTTCTTCTTCAATGGGTTTATTTTTAGGGTTTCTGTTACTATCGTTGACGCCTTCATCAATGGCCAAATTCGTGGTGGAGAAGAACAGCTTGAGGGTGACTTCACCGGATAGTATCAAGGGAACATACGATAGTGCGATTGGTAACTTTGGGATACCTCAATACGGTGGTAGTATGGCTGGGAACGTTGTGTATCCAAAGGATAATCAAAAGGGTTGTAAGGAGTTTGATGAGTCTGGGATTTCGTTTAAATCTAAGCCTGGTGCTCTTCCCACTATTGTTTTGCTCGATCGTGGAAATTGCTTTTTTGCTTTGAAGGTGTGGAATGCCCAGAAGGCTGGAGCTTCTTCTGTTCTTGTTGCGGATGATATTGAAGAAAAATTAATAACAATGGACACACCTGAGGAGGATGGATCATCTGCAAAATATATAGAGAACATAACAATACCATCGGCTCTCATCGAAAAGAATTTTGGTGAAAAATTAAAGAAAGCCATAAGTGGTGGGGATATGGTTAATGTAAATCTTGATTGGAGAGAGGCCGTCCCTCACCCAGATGATCGTGTGGAGTATGAGCTGTGGACCAACAGCAATGATGAGTGTGGTGTTAAATGTGATATGTTGATGGAATTTGTGAAGGATTTTAAGGGTGCGGCACAAATACTAGAGAAAGGTGGTTATGCCCAGTTTACACCCCACTATATTACTTGGTACTGTCCTCAGGCATTCACGTTAAGTAAGCAGTGCAAGTCTCAGTGCATTAACCATGGAAGATACTGTGCCCCAGATCCCGAGCAAGATTTCAGCACTGGTTATGATGGGAAAGATGTGGTTATTGAAAATTTGAGGCAGTTATGTGTTTTCAAGGTTGCAAATGAAACCAAAAAGCCCTGGGTGTGGTGGGACTATGTTACTGATTTTCAAATTAGGTGCCCAATGAAGGAGAAAAAATACAATAAGAAATGTGCAGATGCTGTCATTGAATCACTTGGTCTTGATATTAAAAAGATTGAAAGGTGCATGGGAGATCCAGATGCCGATTCTGAAAATTCTGTTTTGAAAGAAGAGCAAGATGCCCAGGTTGGGAAGGGATCACGAGGTGATGTTACCATATTGCCAACTCTAGTTGTCAACAGTCGACAATATCGAGGAAAATTGGAGAAAGGTGCTGTTATGAAAGCTATTTGTTCTGGTTTTGAAGAAACTACTGAACCAGCTGTTTGTTTGAGCAGTGAGGTGGAGACAAATGAATGCTTGGAGAACAACGGTGGTTGTTGGAAGGATAAAGCAGCTAACATAACTGCATGCAAGGATACTTTCCGTGGGCGAGTATGTGAATGCCCCTTGGTAGATGGTGTGCAGTTCAAAGGAGATGGTTATACAACTTGTGAAGCTAGTGGACCTGGAAGGTGCAAGATAAACAATGGAGGTTGTTGGCATGAAGCCCGGAATGGACATGCATTTTCTGCTTGTTCGGATAATGGAGGGGTTAAATGCGAGTGTCCTGCAGGGTTTAAAGGTGATGGTGTTAAAAATTGTGCAGACATTGATGAATGCAAGGAGAAGAAAGCTTGTCAGTGCCCTGAATGTAGCTGCAAGAATACCTGGGGAAGCTATAACTGCAGTTGCAGTGGGGATCTTCTGTATATCAGGGACCATGATGCATGCATAAGTAAAACTGCCAGTCAGGAAGGAGGAAAGTCTGCTTGGGCTGCATTTTGGGTCATTGTAGTCGGCTTAGTTCTGGCCGCTTCAGGGGCATACCTTGTCTACAAATATAGAATTAGGTCATACATGGATTCTGAAATAAGGGCCATCATGGCACAGTATATGCCCTTGGACAGCCAATCAGAAGTTGTAAATCATGTCAACGATGAAAGAGCATGA 1899 0.4255 MKIRSSSSMGLFLGFLLLSLTPSSMAKFVVEKNSLRVTSPDSIKGTYDSAIGNFGIPQYGGSMAGNVVYPKDNQKGCKEFDESGISFKSKPGALPTIVLLDRGNCFFALKVWNAQKAGASSVLVADDIEEKLITMDTPEEDGSSAKYIENITIPSALIEKNFGEKLKKAISGGDMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMEFVKDFKGAAQILEKGGYAQFTPHYITWYCPQAFTLSKQCKSQCINHGRYCAPDPEQDFSTGYDGKDVVIENLRQLCVFKVANETKKPWVWWDYVTDFQIRCPMKEKKYNKKCADAVIESLGLDIKKIERCMGDPDADSENSVLKEEQDAQVGKGSRGDVTILPTLVVNSRQYRGKLEKGAVMKAICSGFEETTEPAVCLSSEVETNECLENNGGCWKDKAANITACKDTFRGRVCECPLVDGVQFKGDGYTTCEASGPGRCKINNGGCWHEARNGHAFSACSDNGGVKCECPAGFKGDGVKNCADIDECKEKKACQCPECSCKNTWGSYNCSCSGDLLYIRDHDACISKTASQEGGKSAWAAFWVIVVGLVLAASGAYLVYKYRIRSYMDSEIRAIMAQYMPLDSQSEVVNHVNDERA 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04525 632 Gene3D Laminin 473 553 - -
Mepo4g04525 632 MobiDBLite consensus disorder prediction 349 369 - -
Mepo4g04525 632 SUPERFAMILY PA domain 56 173 IPR046450 -
Mepo4g04525 632 FunFam Vacuolar-sorting receptor 1 25 189 - -
Mepo4g04525 632 FunFam vacuolar-sorting receptor 1 412 468 - -
Mepo4g04525 632 CDD PA_VSR 53 180 - -
Mepo4g04525 632 MobiDBLite consensus disorder prediction 349 366 - -
Mepo4g04525 632 Pfam PA domain 64 166 IPR003137 -
Mepo4g04525 632 Gene3D - 25 189 - -
Mepo4g04525 632 ProSitePatterns Calcium-binding EGF-like domain signature. 519 545 IPR018097 GO:0005509
Mepo4g04525 632 Gene3D Laminin 412 468 - -
Mepo4g04525 632 Pfam Complement Clr-like EGF-like 502 522 IPR026823 -
Mepo4g04525 632 CDD EGF_CA 519 547 - -
Mepo4g04525 632 PANTHER PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 15 621 - -
Mepo4g04525 632 SMART egfca_6 519 561 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04525 Mepo-Chr4 54969958 54976603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04525 26 632 Miscellaneous Gene Families AT2G14740 84.514 0.0 1095
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04525 - - gmx:100803958 1223.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04525 4 54969958 54976603 Mepo4g04525 4 54969958 54976603 ECH
Mepo5g00034 5 354959 359036 Mepo4g04525 4 54969958 54976603 PCT