Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04987 ATGACCTCCAATTTCAACCTTCCAGGAGGAGCTCAAAATCAAAGAGATTCAGAAAAAGGAACGATGATGACACCAACACAGAACCCACTTTCTGAAATATCGCCATCGCCATCTCCGTCGTCCGCGACGGCGCCAGCTCTAGTCCTTTCAAACTCAGGAAAACGGATCGATCAAGCAGGGAAGAAGAAGTACGTGAAGCAAGTAACAGGTCGTCACAACGATACAGAGCTTCATCTAGCAGCTCAAAGAGGTGATGTTGGTGCTGTGAGACAGATCCTTCTTGATATTGATTCTCAGATAATGGGTACTTTGAGTGGTGATGATGATGTTGATCTTAACGCTGAAATTGCTGAAGTTCGTGCTCTTGTTGTGAATGAAGAGAATGAACTTGGTGAAACTGCTTTGTTTACTGCTGCTGAAAAGGGTCATCTTGATGTTGTTAAGGAGTTGTTGAAACATTCAACTCTTCAAACTGTTTCTAAAAAGAATCGATCTGGTTTTGATCCTTTGCATATTGCTGCTAGTCAAGGACATCATGCCATTGTTCAGGTTTTACTAGATTATGACCCAAGCTTAAGCAAAACTATTGGTCCATCCAATGCCACTCCACTTATAACAGCAGCGACGAGAGGGCATGTCGAAGTGGTGAATGAACTTCTGTCAAAGGATGGCAGCTTGTTGGAAATAGCAAGATCCAATGGAAAAAATGCTTTGCATTTAGCTGCTCGTCCGGGCCATACAGAAATCGTGAAAGCCTTGCTCAGCAAAGACCCTCAATTGGCTCGGAGGACTGACAAGAAAGGGCAAACTGCATTGCATATGGCTGTAAAAGGGCAGAGCTGTGACGTGGTGAAATTGCTTCTTGATGCAGATGCTGCTATTGTTATGCTTCCTGACAAATTTGGCAACACAGCATTGCATGTGGCAACCAGGAAAAAGCGAGTAGAGATAGTGAATGAGTTGTTACTCCTGCCAGACACAAACGTAAATGCATTAACACGAGACCACAAAACAGCCCTGGACATTGCCGAAAACCTTCCTCTCTCTGAAGAGTCATCAGATATAAAGGACATCCTCTCTCGATATGGGGCACTTAGAGCTAACGAGCTCAACCAACCCAGGGATGAACTGAGGAAAACCGTTACACAAATTAAGAAAGACGTTCACACACAGCTGGAACAAACCAAGAGAACCAACAAAAATGTCCACAATATATCCAAAGAGCTGAGGAAACTCCACAGAGAAGGAATTAACAATGCCACAAACTCGGTGACAGTGGTGGCTGTGTTGTTTGCTACAGTTGCTTTTGCTGCTATATTCACCGTACCTGGTGGGGATAACAATGATGGATCAGGAGTGGTAGCAAGTTATTCTGCTTTTAAAATTTTCTTCATATTCAATGCTATTGCGCTTTTTACATCTTTGGCTGTTGTGGTTGTTCAAATTACCCTTGTTAGAGGTGAAACTAAAGCAGAGAAAAGGGTAGTTGAGGTGATTAACAAGCTCATGTGGTTGGCTTCTGTCTGTACCTCGGTGGCATTTATTGCCTCTTCGTACATAGTCGTCGGTCGAAGGAACGAGTGGGCTGCAATTCTGGTTACAGTTGTTGGAGGGGTGATAATATCCGGAGTTATTGGCACTATGACTTACTATGTAGTGAGGTCTAAGAGAACAAGATCCATGAGGAAGAAAGAAAAGCAGCTAGCTAGGAGAAGTGGATCCAACTCATGGCATCATTCAGAGTTCTCCAATTCCGAGGTTGATCGAATTTATGCGCTATGA 1782 0.4355 MTSNFNLPGGAQNQRDSEKGTMMTPTQNPLSEISPSPSPSSATAPALVLSNSGKRIDQAGKKKYVKQVTGRHNDTELHLAAQRGDVGAVRQILLDIDSQIMGTLSGDDDVDLNAEIAEVRALVVNEENELGETALFTAAEKGHLDVVKELLKHSTLQTVSKKNRSGFDPLHIAASQGHHAIVQVLLDYDPSLSKTIGPSNATPLITAATRGHVEVVNELLSKDGSLLEIARSNGKNALHLAARPGHTEIVKALLSKDPQLARRTDKKGQTALHMAVKGQSCDVVKLLLDADAAIVMLPDKFGNTALHVATRKKRVEIVNELLLLPDTNVNALTRDHKTALDIAENLPLSEESSDIKDILSRYGALRANELNQPRDELRKTVTQIKKDVHTQLEQTKRTNKNVHNISKELRKLHREGINNATNSVTVVAVLFATVAFAAIFTVPGGDNNDGSGVVASYSAFKIFFIFNAIALFTSLAVVVVQITLVRGETKAEKRVVEVINKLMWLASVCTSVAFIASSYIVVGRRNEWAAILVTVVGGVIISGVIGTMTYYVVRSKRTRSMRKKEKQLARRSGSNSWHHSEFSNSEVDRIYAL 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04987 593 ProSiteProfiles Ankyrin repeat region circular profile. 267 294 - -
Mepo4g04987 593 Gene3D - 72 199 IPR036770 -
Mepo4g04987 593 ProSiteProfiles Ankyrin repeat profile. 267 299 IPR002110 GO:0005515
Mepo4g04987 593 ProSiteProfiles Ankyrin repeat profile. 165 187 IPR002110 GO:0005515
Mepo4g04987 593 SUPERFAMILY Ankyrin repeat 77 346 IPR036770 -
Mepo4g04987 593 Gene3D - 200 393 IPR036770 -
Mepo4g04987 593 ProSiteProfiles Ankyrin repeat region circular profile. 233 256 - -
Mepo4g04987 593 FunFam Ankyrin repeat-containing protein ITN1 46 191 - -
Mepo4g04987 593 Pfam Domain of unknown function 415 521 IPR026961 -
Mepo4g04987 593 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 44 577 - -
Mepo4g04987 593 ProSiteProfiles Ankyrin repeat region circular profile. 165 187 - -
Mepo4g04987 593 ProSiteProfiles Ankyrin repeat region circular profile. 130 154 - -
Mepo4g04987 593 ProSiteProfiles Ankyrin repeat profile. 233 265 IPR002110 GO:0005515
Mepo4g04987 593 FunFam Ankyrin repeat-containing protein ITN1 isoform A 192 391 - -
Mepo4g04987 593 MobiDBLite consensus disorder prediction 1 45 - -
Mepo4g04987 593 Pfam Ankyrin repeats (3 copies) 265 330 IPR002110 GO:0005515
Mepo4g04987 593 Pfam Ankyrin repeats (3 copies) 199 257 IPR002110 GO:0005515
Mepo4g04987 593 Pfam Ankyrin repeats (3 copies) 77 191 IPR002110 GO:0005515
Mepo4g04987 593 ProSiteProfiles Ankyrin repeat profile. 301 334 IPR002110 GO:0005515
Mepo4g04987 593 SMART ANK_2a 233 262 IPR002110 GO:0005515
Mepo4g04987 593 SMART ANK_2a 301 331 IPR002110 GO:0005515
Mepo4g04987 593 SMART ANK_2a 130 159 IPR002110 GO:0005515
Mepo4g04987 593 SMART ANK_2a 267 296 IPR002110 GO:0005515
Mepo4g04987 593 SMART ANK_2a 72 101 IPR002110 GO:0005515
Mepo4g04987 593 SMART ANK_2a 165 194 IPR002110 GO:0005515
Mepo4g04987 593 SMART ANK_2a 199 228 IPR002110 GO:0005515
Mepo4g04987 593 ProSiteProfiles Ankyrin repeat profile. 130 162 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04987 Mepo-Chr4 59079352 59083591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04987 18 593 Miscellaneous Gene Families AT3G12360 81.067 0.0 951
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04987 - - gmx:100802596 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03278 3 42843468 42846284 Mepo4g04987 4 59079352 59083591 ECH
Mepo4g04987 4 59079352 59083591 Mepo4g04987 4 59079352 59083591 ECH