Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03278 ATGGATCACCCCGGCGGCCACGGTCCTCTTTCCGAACTCAACACCCCAAGACCCACCCTATTCCTCTCCACTTCCGGCAAAGCCCTTCTTGTCTCCAACTCCAACAAATCCCTCGTCATTTCCAATTCCGGCAAACGCCTCGTCGAGACACCCAGCAAGAAAAAATATGTAAAACAGGTCACCGGTCGTCATAATGACACCGAGCTTCATCTTGCCGCGCAACGCGGTGATGCTGCCGCTGTTAGGCATATTCTCGCTGAGATTGATGATCAAATGATGGGAACGCTTAGTGGTGCTGAGTTTGATGCTGAAGTTGCGGATATAAGGTCTTCCATTGTTAACGAAGTTAATGACTTGGGTGAAACCGCGCTTTTTACCGCTGCTGAGAAAGGTCATTTTGATGTTGTTAAAGAGCTTCTTCCTTATACCACCAAAGAAGGACTATCTTGTAAAAACCGCTCTGGTTTTGATCCATTGCACATTGCAGCAAATCAAGGTCACAAAGAGATTGTGCAGTTGCTGCTAGACCATGATCCAGAGCTAATCAAGACATTTGCACAGTCAAATGCAACTCCTCTTGTATCTGCGGCTACAAGAGGGCATACGGATGTTGTTGAATTGTTACTATCATATGATCCTAGTCAGTTGGAGATAGCTAGATCCAATGGAAAGAATGCACTTCATTTATCTGCACGCCAGGGATATGTTGATATTGTCAAGATATTGTTAGGGAAGGACCCACAGCTTGCTCGAAGGACTGATAAGAAAGGACAAACTCCGCTTCATATGGCGGTCAAAGGGGTTAACTGTGAAGTGGTGAAGTTGCTTCTTGCTGCTGATGGTGCAAGTGTCATGCTTCCTGACAAGTTTGGCAATACTGCATTGCATGTAGCCACCAGGAAGAAGAGGGTAGAGATAGTGAATGAGTTGTTGCTTCTTCCCGACACCAATGCGAATGCCCTCACAAGAGACCACAAAACACCTCTTGACCTTGCAGAAGCACTTCCAATATCAGAAGAGATTTTGGAGATCAAGGACTCACTTATTCGTTATGGTGCAGTTAAGGCAAATGATCTCAACCAGCCAAGGGACGAGCTGAGGAAAACCATGACGCAGATTAAGAAAGATGTTTCTTTTCAGCTTGAACAAACTCGAAAAACAAACAAGAATGTGAATGGGATTGCCAAGGAGCTGCGCAAGTTGCACAGAGCAGGAATCAACAATGCTACCAACTCTGTTACTGTGGTTTCTGTGCTATTTGCAACGGTTGCATTTGCAGCACTTTTCACGGTCCCTGGTGGGGATCGTGATAATGGGATGGCTGTGATGGTTCACACTGCATCTTTCAAGACCTTTTTCATCTCTAATGCTATTGCACTTTTCACTTCATTGGCTGTGGTGGTGGTTCAAATAACTGTTGTTAGAGGAGAGATAAAGTCTGAGAGAAGGGTTACAGAGGTGATCAATAAGATGATGTGGTTAGCCTCTGTGTGCACCTCAGTTTCATTTGTTGCAGCATCTTATATAGTAGTTGGTCGACGCAGCCTGTGGGCTGCAATCCTTGTTACGGTTGTAGGGGGGATTGTAATGGGTGGTGTTCTTGGAACAATGACATACTATGTTATCAAATCCAAACGTCACCGAAGAGTGAGGAAGAAAGAGAAGATCTCAAGGAATGGAACACATTCATGGCGTAATTCTGATTCGGAATCAGAAGTAAATCCAATTTATGCAATTTAA 1740 0.4477 MDHPGGHGPLSELNTPRPTLFLSTSGKALLVSNSNKSLVISNSGKRLVETPSKKKYVKQVTGRHNDTELHLAAQRGDAAAVRHILAEIDDQMMGTLSGAEFDAEVADIRSSIVNEVNDLGETALFTAAEKGHFDVVKELLPYTTKEGLSCKNRSGFDPLHIAANQGHKEIVQLLLDHDPELIKTFAQSNATPLVSAATRGHTDVVELLLSYDPSQLEIARSNGKNALHLSARQGYVDIVKILLGKDPQLARRTDKKGQTPLHMAVKGVNCEVVKLLLAADGASVMLPDKFGNTALHVATRKKRVEIVNELLLLPDTNANALTRDHKTPLDLAEALPISEEILEIKDSLIRYGAVKANDLNQPRDELRKTMTQIKKDVSFQLEQTRKTNKNVNGIAKELRKLHRAGINNATNSVTVVSVLFATVAFAALFTVPGGDRDNGMAVMVHTASFKTFFISNAIALFTSLAVVVVQITVVRGEIKSERRVTEVINKMMWLASVCTSVSFVAASYIVVGRRSLWAAILVTVVGGIVMGGVLGTMTYYVIKSKRHRRVRKKEKISRNGTHSWRNSDSESEVNPIYAI 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03278 579 MobiDBLite consensus disorder prediction 551 579 - -
Mepo3g03278 579 Gene3D - 145 249 IPR036770 -
Mepo3g03278 579 ProSiteProfiles Ankyrin repeat profile. 222 254 IPR002110 GO:0005515
Mepo3g03278 579 Gene3D - 295 344 IPR036770 -
Mepo3g03278 579 SUPERFAMILY Ankyrin repeat 69 349 IPR036770 -
Mepo3g03278 579 ProSiteProfiles Ankyrin repeat region circular profile. 222 243 - -
Mepo3g03278 579 Pfam Ankyrin repeat 291 315 IPR002110 GO:0005515
Mepo3g03278 579 SMART ANK_2a 290 320 IPR002110 GO:0005515
Mepo3g03278 579 SMART ANK_2a 64 93 IPR002110 GO:0005515
Mepo3g03278 579 SMART ANK_2a 222 251 IPR002110 GO:0005515
Mepo3g03278 579 SMART ANK_2a 256 286 IPR002110 GO:0005515
Mepo3g03278 579 SMART ANK_2a 154 183 IPR002110 GO:0005515
Mepo3g03278 579 SMART ANK_2a 119 150 IPR002110 GO:0005515
Mepo3g03278 579 SMART ANK_2a 188 217 IPR002110 GO:0005515
Mepo3g03278 579 ProSiteProfiles Ankyrin repeat region circular profile. 154 181 - -
Mepo3g03278 579 Gene3D - 41 144 IPR036770 -
Mepo3g03278 579 Gene3D - 250 294 IPR036770 -
Mepo3g03278 579 ProSiteProfiles Ankyrin repeat region circular profile. 256 277 - -
Mepo3g03278 579 FunFam Ankyrin repeat-containing protein ITN1 37 180 - -
Mepo3g03278 579 ProSiteProfiles Ankyrin repeat profile. 154 181 IPR002110 GO:0005515
Mepo3g03278 579 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 35 563 - -
Mepo3g03278 579 ProSiteProfiles Ankyrin repeat profile. 256 289 IPR002110 GO:0005515
Mepo3g03278 579 Pfam Ankyrin repeats (3 copies) 69 178 IPR002110 GO:0005515
Mepo3g03278 579 Pfam Ankyrin repeats (3 copies) 195 286 IPR002110 GO:0005515
Mepo3g03278 579 Pfam Domain of unknown function 406 510 IPR026961 -
Mepo3g03278 579 ProSiteProfiles Ankyrin repeat profile. 290 323 IPR002110 GO:0005515
Mepo3g03278 579 FunFam Ankyrin repeat-containing protein ITN1 215 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03278 Mepo-Chr3 42843468 42846284 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03278 10 579 Miscellaneous Gene Families AT3G09550 74.957 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03278 - - gmx:100801840 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03278 3 42843468 42846284 Mepo4g04987 4 59079352 59083591 ECH
Mepo3g03278 3 42843468 42846284 Mepo3g03278 3 42843468 42846284 ECH