Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03519 ATGAAGCTTGAACATTCCTTGTTTCTTGGGACACTGGCTCTGCTCTTAGCCACCACTTTCTCATCAGATCCTGACTCTCTTCAAGACCTCTGTGTTGCTGACCTTGCTTCAGGTGTGACAGTGAACGGATTCACTTGCAAAGAGGCATCTAAGGTAAATGCTTTTGATTTCTCCTCCAACATACTGGCCAAACCTGGAAGTACCAACAACACATTTGGCTCAGTGGTGACGGGAGCCAACGTTCAGAAAGTTCCAGGACTCAACACTCTTGGTGTGTCTCTGTCAAGGATTGACTATGCCCCAGGTGGCCTCAACCCACCTCACACTCACCCACGCGCCACCGAGGTGGTGTTTGTGCTTGAAGGCCAACTAGATGTTGGGTTCATAACCACAGCCAATGTGCTCATATCAAAGACAATTAGCAAGGGTGAGATATTTGTGTTCCCAAAAGGCTTAGTTCACTTCCAAAAGAACAATGCCAATGTACCTGCTGCTGTTCTTTCTGCATTCAACAGCCAACTTCCTGGTACACAGTCCATTGCTACTACCTTGTTTGCAGCCACACCTTCTGTTCCAGACAATGTGTTAACCAAGACATTCCAGGTGGGTACCAAAGAGGTTGAGAAAATCAAGTCTAGGCTTGCACCCAAAAAGTAA 657 0.4688 MKLEHSLFLGTLALLLATTFSSDPDSLQDLCVADLASGVTVNGFTCKEASKVNAFDFSSNILAKPGSTNNTFGSVVTGANVQKVPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGQLDVGFITTANVLISKTISKGEIFVFPKGLVHFQKNNANVPAAVLSAFNSQLPGTQSIATTLFAATPSVPDNVLTKTFQVGTKEVEKIKSRLAPKK 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03519 218 SUPERFAMILY RmlC-like cupins 23 213 IPR011051 -
Mepo4g03519 218 Gene3D Jelly Rolls 22 216 IPR014710 -
Mepo4g03519 218 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 19 212 - -
Mepo4g03519 218 Pfam Cupin 62 207 IPR006045 -
Mepo4g03519 218 ProSitePatterns Germin family signature. 103 116 IPR019780 GO:0030145
Mepo4g03519 218 FunFam germin-like protein subfamily 2 member 1 22 216 - -
Mepo4g03519 218 SMART Cupin_1_3 59 208 IPR006045 -
Mepo4g03519 218 PRINTS Germin signature 108 128 IPR001929 GO:0030145
Mepo4g03519 218 PRINTS Germin signature 171 186 IPR001929 GO:0030145
Mepo4g03519 218 PRINTS Germin signature 138 158 IPR001929 GO:0030145
Mepo4g03519 218 CDD cupin_OxOx 23 214 IPR001929 GO:0030145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03519 Mepo-Chr4 44690935 44692808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03519 11 218 Miscellaneous Gene Families AT3G05930 55.502 3.18e-82 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03519 - - gmx:100791828 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03870 3 48185509 48187036 Mepo4g03519 4 44690935 44692808 PCT