Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03500 ATGGCCAATGAAGCTTCTTTCTGCCTCATGTTTCTCTCTTCTCTCTTAATTTCATGTTCTGGATCTTTGGTGGGTTTCTCCTATCATGAGAGAGGGGACACTTTGACATCATTCCTCCACCAGAGCAAAGTTTCTTCATCCCAGATTCGAGCTTTCGTCACAGATCATAGGATTTTGAGCACTCTTACCAACTCAAAAGTGTTAGTTGATCTCTACTTAAACAAAAGCCAAGTTGAAAAATTCATTATTTCAAACCCTTCAGCAGTTTCTGAGCTTAAAGCTCAACTAGTGAACTTTCTTCCACATTTAAACATCAAAAGCATCATTGCTAGCTGTGGAAGTGAGTGCTTAGTACAAAATGAGATGCCTTTGGTTATGCATGCTCTTAAATCAATTCATTCAATTCTCAGTGATCTTCACATAAGTAAGGAAGTAAAAATCTCGGTCGCATTTCCACTTCAAGTCTTAAGGAAGTTGAATGCATCACAAGAACACGAAATTCGTAGATTACTTTTATTTATAAAGGAAATGAAATCGTTTGTGATGATAGAAGATAGCATTGATGGAGAATTAAGTGTGGATGATCATTTTGTTCAAACAATTATCAACCGCGCTAATCTTGCTGCTTCTGTTCTTCCTTGCAAAGATGTTCCTGTGGTTCTTACAATCAAGTGTTCAGTTATACCAAGTTCCATAGAAGTAACTCAATTTAGTAAAAGAGTATCCAGATATTTAGAAGCAAAAAGAATAGCTGCATTATATGTAGAACTGCATACAACAGAAGATTCTTCGATGAAAGAGCTCAAAAGGGAAGAGGAAGGTATGTTTACTTTGTCTAGAAGAGAGATCTTAAGCAAATTCCACAGAAGAAAAATTCTAGATAACACAAACAGTCCAACAAACACAGTTTACCCTACAAATCCAACACCAGTTATTACACCCTCAGATACACCAACCATTATAGCAGTTCCTTCCACAAATCCTGTCACAATTTCCCCTACAAATCCAGCTGCAATGCCTGTAACAGTTCCTTCAACTACACCTGCTGTTCCTTTACCTTCAACAACTCCAACCATTACACCGGCACCAGTCTTCAATCCAGCTACAACTCCTACAACAGTTCCAGGTGCACCACCAGTAACATCTTATCCACCTCCAGTAACATCCTATCCACCTCCATTAGGAAATGTTCCAGTGGTAAACCCTCAACAGCCACCTCCTTCAAACACAAATGCTCCTTCTATTCAGGGACAGAGTTGGTGTGTGGCAAAAACAGGTGCTCCACAAGCTTCCCTTCAATCAGCATTGGATTATGCTTGTGGAAATGGTGCTGATTGTTCTCAAATACAACAGGGTGCAAGTTGTTACAGTCCTGTTACTTTGCAGAACCATGCTTCTTTTGCCTTCAACAGTTACTATCAAAAGAAGCCAGCTCCGACAAGTTGCGACTTTGGAGGCGCTGCTATGTTAGTTAGCTCAAATCCAAGTTCTGATTCTTGCATTTATCCGTCATCATCTTCATCGTCATCGTCATCCTCAACTTCACCAATGATATCATCTCCAACACCACCTACACAATCAACTCCAACTTCAATACCACCACCAAGTCTAACAACACCTTCACCATCTATTCCAACAATAGCTCCACCAACAATGTCAACAGCTCCATCATCAATTCCAACAGCTCCACCAACATCTTCAGGCACTTTTGGCTATGGTACCCCACCTTCAGTGTTAAACTCGAGCAACCCAGCTTCAGGTACAATGCCAGATTTTGGGTCTGATAGCCCTCCTATTGTAAACACAACATCTGCCTCGCACCCTCGAGCTCTGAAACCTTTTACTGGCTGTATAGTCTTGATGATTCCATTTGTCACTGCAAGCCTCAGCATGCGCCTATAG 1902 0.408 MANEASFCLMFLSSLLISCSGSLVGFSYHERGDTLTSFLHQSKVSSSQIRAFVTDHRILSTLTNSKVLVDLYLNKSQVEKFIISNPSAVSELKAQLVNFLPHLNIKSIIASCGSECLVQNEMPLVMHALKSIHSILSDLHISKEVKISVAFPLQVLRKLNASQEHEIRRLLLFIKEMKSFVMIEDSIDGELSVDDHFVQTIINRANLAASVLPCKDVPVVLTIKCSVIPSSIEVTQFSKRVSRYLEAKRIAALYVELHTTEDSSMKELKREEEGMFTLSRREILSKFHRRKILDNTNSPTNTVYPTNPTPVITPSDTPTIIAVPSTNPVTISPTNPAAMPVTVPSTTPAVPLPSTTPTITPAPVFNPATTPTTVPGAPPVTSYPPPVTSYPPPLGNVPVVNPQQPPPSNTNAPSIQGQSWCVAKTGAPQASLQSALDYACGNGADCSQIQQGASCYSPVTLQNHASFAFNSYYQKKPAPTSCDFGGAAMLVSSNPSSDSCIYPSSSSSSSSSSTSPMISSPTPPTQSTPTSIPPPSLTTPSPSIPTIAPPTMSTAPSSIPTAPPTSSGTFGYGTPPSVLNSSNPASGTMPDFGSDSPPIVNTTSASHPRALKPFTGCIVLMIPFVTASLSMRL 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03500 633 Gene3D - 414 517 - -
Mepo4g03500 633 PANTHER BETA-1,3 GLUCANASE 394 513 IPR044788 -
Mepo4g03500 633 SMART X8_cls 419 502 IPR012946 -
Mepo4g03500 633 MobiDBLite consensus disorder prediction 501 604 - -
Mepo4g03500 633 Gene3D Glycosidases 23 186 - -
Mepo4g03500 633 Pfam X8 domain 420 489 IPR012946 -
Mepo4g03500 633 PRINTS Proline rich extensin signature 294 310 - -
Mepo4g03500 633 PRINTS Proline rich extensin signature 324 345 - -
Mepo4g03500 633 PRINTS Proline rich extensin signature 346 362 - -
Mepo4g03500 633 PRINTS Proline rich extensin signature 386 411 - -
Mepo4g03500 633 PRINTS Proline rich extensin signature 367 384 - -
Mepo4g03500 633 MobiDBLite consensus disorder prediction 522 549 - -
Mepo4g03500 633 MobiDBLite consensus disorder prediction 550 604 - -
Mepo4g03500 633 MobiDBLite consensus disorder prediction 501 521 - -
Mepo4g03500 633 FunFam Glucan endo-1,3-beta-glucosidase 4 414 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03500 Mepo-Chr4 44385351 44387912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03500 395 505 Glycoside Hydrolase AT2G05790 53.448 1.95e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03500 - - tpra:123886415 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03500 4 44385351 44387912 Mepo4g03500 4 44385351 44387912 ECH
Mepo3g03885 3 48337271 48339661 Mepo4g03500 4 44385351 44387912 PCT