Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03885 ATGGCCAATGAAGCAGCTTCTACTTGCCTATTGTTCCTATCTTTTCTCATTCTCTTCTGTTCTGGAACCAATGCATTTTCAACTTTTTCTGGAGCAAGATTCCTTCAAAAAAAGTCTCAGATTCAGTTTCTTGAAACAGATCACAAGATTTGGAGAAAACTTCAAGACACAAACCCAGCACCAACAATAATCACTGTTCCTTCAACCAATCCTGTCACAACAGTTTCTCCAACAAATCCAGGTGCAACACCTGTCACAGTTCCTTCTACTACTCCACCAGCTGTTCCATTATCACCAACAAATCCAGCAAATTCACCAGTACCTGTTACACCTCCTATAACAGTTCCAGGAGGAACAACACCAGTGAATTCTAATCCACCACCATCACCATTATCAGGAGGAACAGGTGTCACAAATCCTCCTCCTACTTCTCAAGGAGGTAGCTGGTGTGTGGCTAAACCTGGAACACCACAGTCTACACTTCAAACAGCATTGGACTATGCTTGTGGAACAAAAGGAACTGATTGTTCACAAATAAACCAAGGTGGTATCTGTTACAATCCAAATTCACTTCAAAACCATGCTTCTTTTGCATTCAACAGCTACTATGTAAAGAATCCTGCTGCAACAAGCTGTGACTTTGGAGGGGTTGCTACCATTACTAACACTAATCCTAGTTCTGGTACCTGCATCTTCCCATCATCTTCAGGAGGAGGAGCTGGCGCAGGCACAGGCACATCCGGCGGCTCTGGTACTACCTCATCTCCGGTGGGTTTTGGGCCTCAGAGCTCTCCATTGGATTCCTCTCATTCAACTGGTCTGAGACCTTTGCTAAGCTGCATGGTGCTGGTGACGTTATTGGTCAGTGGAAGACTCGGCATGAGCCCATAG 891 0.4489 MANEAASTCLLFLSFLILFCSGTNAFSTFSGARFLQKKSQIQFLETDHKIWRKLQDTNPAPTIITVPSTNPVTTVSPTNPGATPVTVPSTTPPAVPLSPTNPANSPVPVTPPITVPGGTTPVNSNPPPSPLSGGTGVTNPPPTSQGGSWCVAKPGTPQSTLQTALDYACGTKGTDCSQINQGGICYNPNSLQNHASFAFNSYYVKNPAATSCDFGGVATITNTNPSSGTCIFPSSSGGGAGAGTGTSGGSGTTSSPVGFGPQSSPLDSSHSTGLRPLLSCMVLVTLLVSGRLGMSP 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03885 296 FunFam Glucan endo-1,3-beta-glucosidase 4 143 236 - -
Mepo3g03885 296 Pfam X8 domain 149 219 IPR012946 -
Mepo3g03885 296 SMART X8_cls 148 232 IPR012946 -
Mepo3g03885 296 MobiDBLite consensus disorder prediction 114 128 - -
Mepo3g03885 296 MobiDBLite consensus disorder prediction 62 85 - -
Mepo3g03885 296 MobiDBLite consensus disorder prediction 241 270 - -
Mepo3g03885 296 PANTHER BETA-1,3 GLUCANASE 22 246 IPR044788 -
Mepo3g03885 296 MobiDBLite consensus disorder prediction 129 148 - -
Mepo3g03885 296 MobiDBLite consensus disorder prediction 62 93 - -
Mepo3g03885 296 MobiDBLite consensus disorder prediction 114 148 - -
Mepo3g03885 296 Gene3D - 144 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03885 Mepo-Chr3 48337271 48339661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03885 148 283 Glycoside Hydrolase AT1G66250 41.007 3.40e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03885 - - psat:127132491 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03885 3 48337271 48339661 Mepo3g03885 3 48337271 48339661 ECH
Mepo3g03885 3 48337271 48339661 Mepo4g03500 4 44385351 44387912 PCT