Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03413 ATGTCTCAAACCTCTCAAACCCTAATGCCTCTCGATTCCGAAGAATCACCATCCTCAACCCCAATTCCAACTTCCCCAAATCCACCCCCAAATTCCACCTCCACCGTCCTCCACCTCTCCTTCAACCAAGACTCCGGCTGCTTCGCCGCCGGCACCGATCATGGCTTCCGCATCTACAACTGCGACCCCTTCCGCGAAATTTTCCGCCGTGATTTTGGTCCCGGCGGCGGAATTGGTTTAGTCCACATGCTATTCCGCTGCAACATCCTCGCCTTCGTCGGCGGTGGATCAGACCCACGCTATCCAGCAAACAAGGTGATGATCTGGGACGATCATCAATCACGGTGTATCGGAGAGTTGTCGTTTCGTTCGGAGGTGAAAGGTGTTCGTCTTCGTCGCGATAGAATCGTCGTTGTTTTGGCGCATAAGATTTTTGTTTACAATTTTGCTGATCTTAAAGTTCTTCATCAAATTGAAACTATTGCTAACCCTACGGGGCTATGTGAAGTTTCACATGTTTCGGGAACTATGGTTTTGGCTTGTCCTGGGTTGCAGAAGGGTCAAATTAGGGTTGAGCATTATGCTTCTAAGAGAACTAAGTTCATAATGGCACATGATTCGAGAATTGCGTGTTTTGCTATAACCCAAGATGGACGTTTGCTTGCTACTGCAAGCTCCAAAGGGACTCTTGTTAGGGTTTTCAATACCTTGGATGGTTCTTTGCTTCAAGAGGTACGGAGAGGTGCTGACCGAGCCGAGATATATAGCCTTGCCTTCTCTTCCACTGCACAGTGGTTAGCTGTCTCGAGTGACAAGGGAACCGTTCATGTCTTCAACTTGAAGGTTGATTCGGGATTGTTGGGGCACGATAGATCGCATACTACATCCGAGTCTAGTCCTACTAGCCCGTCGGCTGCTTCGTCTCTTTCATTTATTAGAGGTGTGTTACCTAAGTATTTTAGCTCAGAGTGGTCCGTGGCTCAATTTCGCTTGCAAGAAGGTTTACAATATCATGTTGCCTTTGGTCATCAGAAAAATACAATTGTAATACTTGGCATGGATGGCAGCTTCTATCGATGTCAATTTGACACTGCAACTGGTGGGGAGATGACACAACTCGAGTATTACAATTTTCTAAAGCCAGAAGAGACATTCTAG 1158 0.4698 MSQTSQTLMPLDSEESPSSTPIPTSPNPPPNSTSTVLHLSFNQDSGCFAAGTDHGFRIYNCDPFREIFRRDFGPGGGIGLVHMLFRCNILAFVGGGSDPRYPANKVMIWDDHQSRCIGELSFRSEVKGVRLRRDRIVVVLAHKIFVYNFADLKVLHQIETIANPTGLCEVSHVSGTMVLACPGLQKGQIRVEHYASKRTKFIMAHDSRIACFAITQDGRLLATASSKGTLVRVFNTLDGSLLQEVRRGADRAEIYSLAFSSTAQWLAVSSDKGTVHVFNLKVDSGLLGHDRSHTTSESSPTSPSAASSLSFIRGVLPKYFSSEWSVAQFRLQEGLQYHVAFGHQKNTIVILGMDGSFYRCQFDTATGGEMTQLEYYNFLKPEETF 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03413 385 MobiDBLite consensus disorder prediction 1 20 - -
Mepo4g03413 385 MobiDBLite consensus disorder prediction 1 34 - -
Mepo4g03413 385 Gene3D - 13 359 IPR015943 GO:0005515
Mepo4g03413 385 SUPERFAMILY WD40 repeat-like 27 284 IPR036322 GO:0005515
Mepo4g03413 385 Pfam WD domain, G-beta repeat 248 279 IPR001680 GO:0005515
Mepo4g03413 385 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 32 378 - -
Mepo4g03413 385 SMART WD40_4 18 60 IPR001680 GO:0005515
Mepo4g03413 385 SMART WD40_4 238 279 IPR001680 GO:0005515
Mepo4g03413 385 SMART WD40_4 195 235 IPR001680 GO:0005515
Mepo4g03413 385 FunFam Autophagy-related protein 18a isoform A 34 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03413 Mepo-Chr4 43613530 43616878 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03413 K22991 - gmx:100787427 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03413 4 43613530 43616878 Mepo4g03413 4 43613530 43616878 ECH
Mepo3g03699 3 46671709 46674968 Mepo4g03413 4 43613530 43616878 ECH