Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03699 ATGGCCACTCTTCCTGCTTCTCCTTCACCCCCTTGGCCTACTAATCCTAACCCTAATAATAATAATAATCCCAATTCTATTTCAATTCCGAACCCTAATTTCCATCCTGATCAATCTCAAACCCTTGATTTCGATTCCCTTTTGTCTCCCCAACCTCAATCACCTTCCGCCACCACCACACCGCCGCTTCCTCCGTCGCTTCTTCAACTCTCCTTCAACCAAGACCACGCTTGCTTCGCCGCCGCTACAGACAACGGCTTCCGCATCTACAACTGCGACCCATTCCGCGAACTCTTCCGCCGCGAATTCGGAGGGGGAGGAATCGCTCACGTTGAGATGCTTTTCCGCTGCAATATCTTAGCACTTGTTGGTGGTGGCTCCCACCCTCAGTATCCTCCTAACAAAGTCATGATCTGGGATGATCATCAAGGTACTTGCATCGGTGAACTCTCCTTCCGTGCTACCGTTCGTGGTGTTCGATTGCGGCGTGATCGGATAATTGTGGTGGTGGAGCAGAAGATATTTGTTTATAATTTCGCTGATTTAAAGCTGTTGCATCAGATTGAAACTATTGCTAACCCTAAGGGTTTATGTTCAGTTTCACATGTGTCTGATTCTCTTGTTCTTGCCTGTCCTGGTTTGCATAAGGGTCAGATTCGTGTTGAACATTTTGCACAGAAGAAAACAAAGTTTATTTCTGCTCATGATTCGAGAATTGCTTCGTTTGCTCTCACACTTGATGGACAGTTAATAGCAACTGCCAGTGTCAAGGGTACGCTCATTCGGATTTATGATACTGAAAGCGGCACCCTACTTCAGGAAGTTAGAAGGGGTGCAAATGCAGCAGAGATATATAGTTTGGCGTTTTCTTCGACGGCTCAGTGGTTAGCAGTTTCAAGTGACAAGGGTACTGTCCATGTTTTCAGCCTTAAGGTTAATTCAAGTGGTGTTCCTGAGAACGAAACATCACAAGGTTCGTCTAGTTCAGATGCTGCCATTGCCCCTTCTAGCTCATCTCGCTCCTTCATTAAATTTAAAGGAGTGTTGCCCAAGTATTTCAATTCAGAGTGGTCAGTTGCCCGGTTTCACTTGCATGAGGGTACTCAGTACACAGTTGCTTTTGGTCTACAACAGAATACAGTCATAATTCTTGGCATGGATGGAAGCTTCTATAGATGCCAATTTGATGCAGCGAATGGAGGGGAAATGACCCAGCTGGAACATCACAACATTTTAATTCCAGAAACTGCTTTGTGA 1257 0.4558 MATLPASPSPPWPTNPNPNNNNNPNSISIPNPNFHPDQSQTLDFDSLLSPQPQSPSATTTPPLPPSLLQLSFNQDHACFAAATDNGFRIYNCDPFRELFRREFGGGGIAHVEMLFRCNILALVGGGSHPQYPPNKVMIWDDHQGTCIGELSFRATVRGVRLRRDRIIVVVEQKIFVYNFADLKLLHQIETIANPKGLCSVSHVSDSLVLACPGLHKGQIRVEHFAQKKTKFISAHDSRIASFALTLDGQLIATASVKGTLIRIYDTESGTLLQEVRRGANAAEIYSLAFSSTAQWLAVSSDKGTVHVFSLKVNSSGVPENETSQGSSSSDAAIAPSSSSRSFIKFKGVLPKYFNSEWSVARFHLHEGTQYTVAFGLQQNTVIILGMDGSFYRCQFDAANGGEMTQLEHHNILIPETAL 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03699 418 Gene3D - 67 390 IPR015943 GO:0005515
Mepo3g03699 418 MobiDBLite consensus disorder prediction 315 334 - -
Mepo3g03699 418 MobiDBLite consensus disorder prediction 19 54 - -
Mepo3g03699 418 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 64 410 - -
Mepo3g03699 418 MobiDBLite consensus disorder prediction 1 66 - -
Mepo3g03699 418 MobiDBLite consensus disorder prediction 1 18 - -
Mepo3g03699 418 SMART WD40_4 225 265 IPR001680 GO:0005515
Mepo3g03699 418 SMART WD40_4 268 309 IPR001680 GO:0005515
Mepo3g03699 418 FunFam Autophagy-related protein 18a isoform A 65 397 - -
Mepo3g03699 418 Pfam WD domain, G-beta repeat 278 308 IPR001680 GO:0005515
Mepo3g03699 418 SUPERFAMILY WD40 repeat-like 58 314 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03699 Mepo-Chr3 46671709 46674968 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03699 K22991 - gmx:100781692 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03699 3 46671709 46674968 Mepo3g03699 3 46671709 46674968 ECH
Mepo3g03699 3 46671709 46674968 Mepo4g03413 4 43613530 43616878 ECH