Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02907 ATGGCATTTAAAGGGTATATGATGTGTCTAGTTATAGTCCTAGTGGCCAATATGTTGACACAAAATGAAGCTCAATCAGGTTGTACATCTACACTCACTAGCTTGAGCCCTTGTCTAAACTACATAATGGGCACTTCTTCAAATCCATCATCTTCATGTTGTTCACAACTCTCAAGTGTAGTCCAATCTTCTCCACAGTGTCTATGCTCCCTCCTTAATGGTGGTGGTTCCTCTTTTGGAATCACTATAAATCAAACACTTGCTCTTTCTCTCCCTTCTGCTTGTAAGGTTCAAACTCCACCTGTTAGTCAGTGCAAAGGTGGCAATGGACCAACATCTCCTTCAAGTTCAACTTCTCCAGTTGGTTCTCCAACTGAATCACCTGAAGGCACAATAACACCTTCTGCTTCAGACTTTCCCTCGGCCTCAGGTGCAGGATCAAAAAGTGTCCCATCAACAGACGGTGGTTCGTCTGATGGAAGCGCTGTTAAAGTCTCGTTCCACTTTGTTCTTTCCCTTCTTGCCATTGTATTTTTTGTGGTCACCAAGTTCTGA 555 0.4324 MAFKGYMMCLVIVLVANMLTQNEAQSGCTSTLTSLSPCLNYIMGTSSNPSSSCCSQLSSVVQSSPQCLCSLLNGGGSSFGITINQTLALSLPSACKVQTPPVSQCKGGNGPTSPSSSTSPVGSPTESPEGTITPSASDFPSASGAGSKSVPSTDGGSSDGSAVKVSFHFVLSLLAIVFFVVTKF 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02907 184 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Mepo4g02907 184 PRINTS Plant phospholipid transfer protein signature 82 99 IPR000528 GO:0006869|GO:0008289
Mepo4g02907 184 PRINTS Plant phospholipid transfer protein signature 48 62 IPR000528 GO:0006869|GO:0008289
Mepo4g02907 184 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 25 104 - -
Mepo4g02907 184 MobiDBLite consensus disorder prediction 102 157 - -
Mepo4g02907 184 Pfam Probable lipid transfer 11 105 IPR016140 -
Mepo4g02907 184 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 27 106 IPR036312 -
Mepo4g02907 184 SMART aai_6 28 105 IPR016140 -
Mepo4g02907 184 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 8 161 IPR043325 -
Mepo4g02907 184 Gene3D - 25 105 IPR036312 -
Mepo4g02907 184 CDD AAI_LTSS 35 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02907 Mepo-Chr4 38080305 38087405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02907 1 181 Lipid Metabolism Gene Families AT3G22600 45.109 9.08e-43 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02907 - - gmx:100306151 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02907 4 38080305 38087405 Mepo4g02907 4 38080305 38087405 ECH
Mepo4g02907 4 38080305 38087405 Mepo3g03048 3 40587311 40588778 PCT