Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03048 ATGTCAGAACATCTTAAAACAATGGCACAACGAAGCATTGAGATGCTGCTAAGCATGTTCTTTGTTATAATGGCTCTTAGGGGTGTCACAGTGGCACAAACCGACTCAAATTGCGCCAATGTGCTCATAAGTCTTTCTCCGTGCCTTGACTACATCACAGGACAGACCTCCACCCCTTCCTCTGGTTGCTGCTCACAACTTGCCTCCGTGGTGGGGTCACAGCCACAATGTCTATGTGAAGTTGTTAACGGCGGTGCTTCATCTATTGCTGCTAGTCTTAACATCAATCAGACTCGTGCTTTGGCGCTCCCCACGGCTTGCAATATCCAAACACCTCCTATCAATACCTGCCCTGGCTCAACTGCTTCCTCTTCTCCTCCGCCTCCGGCAGGTGTTTCTATTTCCAACATTCCAAATTCTCCTTCAGGGTATTTTACATCAACAACAGGAAGCGGTGGAAGTATCCGTGGCTCAACCTCATCTTATAGAACATCAAGTTCTGTGAAATTACATTGTTCTTTGTTTGTTTTGGTTATCTTTGCAAATCTGACATTCACTTTCATGACCATGACTTAG 576 0.4566 MSEHLKTMAQRSIEMLLSMFFVIMALRGVTVAQTDSNCANVLISLSPCLDYITGQTSTPSSGCCSQLASVVGSQPQCLCEVVNGGASSIAASLNINQTRALALPTACNIQTPPINTCPGSTASSSPPPPAGVSISNIPNSPSGYFTSTTGSGGSIRGSTSSYRTSSSVKLHCSLFVLVIFANLTFTFMTMT 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03048 191 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 20 150 IPR043325 -
Mepo3g03048 191 SMART aai_6 38 117 IPR016140 -
Mepo3g03048 191 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 37 117 IPR036312 -
Mepo3g03048 191 PRINTS Plant phospholipid transfer protein signature 58 72 IPR000528 GO:0006869|GO:0008289
Mepo3g03048 191 PRINTS Plant phospholipid transfer protein signature 37 53 IPR000528 GO:0006869|GO:0008289
Mepo3g03048 191 PRINTS Plant phospholipid transfer protein signature 94 111 IPR000528 GO:0006869|GO:0008289
Mepo3g03048 191 CDD AAI_LTSS 45 109 - -
Mepo3g03048 191 Gene3D - 35 115 IPR036312 -
Mepo3g03048 191 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 35 116 - -
Mepo3g03048 191 Pfam Probable lipid transfer 30 117 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03048 Mepo-Chr3 40587311 40588778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03048 13 117 Lipid Metabolism Gene Families AT3G22600 51.429 2.68e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03048 - - cam:101512493 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03048 3 40587311 40588778 Mepo3g03048 3 40587311 40588778 ECH
Mepo4g02907 4 38080305 38087405 Mepo3g03048 3 40587311 40588778 PCT