Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02437 ATGGAGGCGTTTCAAGTAGCTAGTGAAGGAGTTTGTATGCAACTTGCGTTTATTTGGAGGAAAATAAGAGAACCTTTGATCGTGCCAATGCTGAGAGTGGCAGTGTTTATGTGCCTAGGCATGTCATTGATGATATTGGTTGAGATAGTTTACATGGGAGTTGTCATTTGTTTTGTGAAGTTGTTTAAAAGAACACCAGAGAAGCGTTATAAATGGGAGACTATTAAGGATGATGTTGAGTTGGGAAGCTCTAATTACCCTATGGTTCTTGTTCAAATCCCAATGTACAATGAAAGAGAGGTTTATCAGCTATCAATTGGTGCTGCATGTGAACTCTCTTGGCCTTCTGATAGAATCATCATACAAATTCTTGATGATTCAACTGACCCAACAATCAAGGAGTTGGTACAGGAAGAATGCCTAAAATGGGGAAGCAAAGGTGTGAACATAAAGTATGAAGTTAGGGACAATAGAAATGGATACAAAGCAGGTGCTCTAAAGGAGGGAATGAAACATAGCCATGTCCTACAATGTGAATATGTTGCCATCTTTGATGCTGATTTTCAACCTGAACCTGATTTTCTTTGCCAAACCATTCCATTCCTTGTCAATAATGCTGATATAGGTCTCGTTCAGGCTCGCTGGAAGTTTGTAAATGCGAATGAATGTTTGATGACGAGGATGCAAAAGATGTCGCTTGATTATCATTTTACAGTTGAACAAGAAGTGGGGTCTTCTACTTATGCCTTCTTTGGCTTCAATGGAACTGCTGGTGTGTGGAGAATTTCGGCGCTGAATGAAGCTGGTGGGTGGAAAGATAGGACCACAGTTGAAGATATGGATCTGTCTGTACGTGCCAGTCTTGAAGGATGGAAATTCTTATACCTCTCCAATATACAGGTTAAAAATGAATTGCCAAGTACTTTAAATGCCTATAGGTACCAACAACATCGATGGTCATGTGGGCCATCCAATCTATTCAGGAAAACGATTATGGAGATTCTCACAAACAAGAAAGTGTCTTTGTGGAAGAAAACATATATGATTTACAGTTTTTTCTTTGTTCGGAAGATTGTGGTCCACATAAACACATTTGTGTTATATTGCATTGTGTTACCTGCAACTGTTATGGTGCCTGAGGTTGTGGTCCCTAAATGGGGAACTGTTTATATTCCTTCCATCATCACCCTCCTAAACGCGGTTGCAGCACCAAGGTCATTGCATTTAGTTGTATTTTGGATTCTCTTTGAGAATACCATGTCTCTAAATCGAGCAAAGGCAACAATTATTGGTCTACTAGAGACTAGTAGAGTGAATGAATGGGTTGTCACCAAAAAACATGGAAATGCTCTTAAGGACCAAGATAGTAAAGGACTTGAAAAGCATCAATTTAAGATTGGAAACAGGATTCACATGTCAGAACTTTTTGTTGGATTCTACCTCCTATTTTGTGGCTGCTATGATCTTATGTATGGGAAAAATTACTACTTCTTATTCCTATATATGCAAGCAATTGCTTTCTTCATCCTGGCCTTTGGATATGTTGGAACTTTTGTTCCCAACTCCTAG 1569 0.3913 MEAFQVASEGVCMQLAFIWRKIREPLIVPMLRVAVFMCLGMSLMILVEIVYMGVVICFVKLFKRTPEKRYKWETIKDDVELGSSNYPMVLVQIPMYNEREVYQLSIGAACELSWPSDRIIIQILDDSTDPTIKELVQEECLKWGSKGVNIKYEVRDNRNGYKAGALKEGMKHSHVLQCEYVAIFDADFQPEPDFLCQTIPFLVNNADIGLVQARWKFVNANECLMTRMQKMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLSVRASLEGWKFLYLSNIQVKNELPSTLNAYRYQQHRWSCGPSNLFRKTIMEILTNKKVSLWKKTYMIYSFFFVRKIVVHINTFVLYCIVLPATVMVPEVVVPKWGTVYIPSIITLLNAVAAPRSLHLVVFWILFENTMSLNRAKATIIGLLETSRVNEWVVTKKHGNALKDQDSKGLEKHQFKIGNRIHMSELFVGFYLLFCGCYDLMYGKNYYFLFLYMQAIAFFILAFGYVGTFVPNS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02437 522 FunFam Glucomannan 4-beta-mannosyltransferase 9 78 306 - -
Mepo4g02437 522 SUPERFAMILY Nucleotide-diphospho-sugar transferases 84 365 IPR029044 -
Mepo4g02437 522 Pfam Glycosyl transferase family group 2 180 377 IPR001173 -
Mepo4g02437 522 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 13 517 - -
Mepo4g02437 522 CDD CESA_CaSu_A2 87 323 - -
Mepo4g02437 522 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 78 306 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02437 Mepo-Chr4 32546721 32551518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02437 2 521 Miscellaneous Gene Families AT5G03760 71.401 0.0 809
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02437 K13680 - gmx:100782772 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02437 4 32546721 32551518 Mepo2g01752 2 25610737 25616670 ECH
Mepo4g02437 4 32546721 32551518 Mepo4g02437 4 32546721 32551518 ECH
Mepo3g03444 3 44386667 44391858 Mepo4g02437 4 32546721 32551518 PCT