Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03444 ATGGATCGTTTTTCTTCTACTACTACTACTATCCCTTTTGCATTACAAGGAGCCAAAGATGACCTACCCATGCAGATTTCTTTGATTTGGAGTCAAATCAAAGCTCCATTGATTGTTCCATTATTAAGAATATCAGTGTTTTTGTGTTTGATAATGTCGGTGATGATGTTCATTGAGAGGGTTTATATGGGTGTTGTCATTACTCTTTTGAAGTTATTTGGAAGAAAACCTGAAAAACGTTACAAATGGGAACCAATTAAGGATGATATTGAGTTAGGAAACTCTTGTTATCCTATGGTTCTTGTTCAAATACCTATGTACAATGAAAGAGAGGTTTATCAATTGTCAATTGGAGCTGCATGTGGTCTTTCATGGCCTTCTGATAGGATCATTATACAAGTTCTTGATGACTCCACTGACCCAGCTATCAAGGAGTTGGTGCAACTAGAATGCCAAAGATGGGCAAGCAAAGGAGTGAATATAAAGTATGAAGTTAGGGACAATAGAAATGGATACAAAGCAGGGGCTTTAAAAGAAGGAATGAAGCATAGCTATGTGAAACAATGTGATCATGTTGCAATATTTGATGCTGATTTTCAACCAGAGCCTGATTTTTTGTGGCGTACCGTGCCATTTATGGTGCATAATCCTGAAATTGGGCTTATTCAAGCTCGCTGGAAATTTGTGAATTCGGATGAATGTATGATGACTAGAATGCAAGAGATGTCACTAGATTACCATTTTACTGTGGAACAAGAAGTGGGGTCTTCCACTTATGCCTTCTTTGGCTTCAACGGGACTGCGGGAGTATGGAGAATTTCGGCACTGAATGAGGCTGGTGGATGGAAGGATAGGACCACAGTTGAAGATATGGACTTGGCTGTCCGAGCTAGTCTCAAAGGATGGAAGTTCTTATACTTGTCTAACTTGAAGGTTAAAAATGAACTGCCAAGTACTTTCAAGGCCTACCGTTACCAACAGCATCGTTGGTCTTGTGGACCAGCCAATCTCTTCCGAAAAATGGTTATGGAGATTATTAGAAACAAGAAAGTGTCCTTGTGGAAGAAGATACATGTAATTTACAGTTTCTTCTTTGTTCGGAAGGTCGTAGCACACATCAATACGTTTGTGTTTTATTGCATTGTTCTACCTGCAACAGTTTTGGTACCTGAAGTCGCAGTCCCAAAATGGGGAGCTGTTTATATCCCTTCAGTTATCACTCTTCTCAATGCAGTTGGAACTCCAAGGTCACTCCATTTACTTGTGTTTTGGATTCTATTTGAGAATGTCATGTCTCTACATAGAACAAAGGCAACTGTTATTGGTCTACTGGAGGCTAGTCGAGTGAATGAATGGATTGTCACCGAGAAACTTGGAGATGCTCTCAAGGCTAAAGCAGGAACTAAAGCCCTCAAGAAGCCTCGATTCAGGATTGAAGACAGAATTCACTTGTTGGAACTCGGTGTTGGAATGTACCTCTTCTTTATCGGCTGCTACGATGTCATGTTTGGGAAAAACCACTTCTTCATCTTTCTCTTTATCCAAGCAATCGCCTTCTTCATCATGGCATTTGGATATGTCGGAACCTACGTTCCCAACTACTAG 1605 0.4025 MDRFSSTTTTIPFALQGAKDDLPMQISLIWSQIKAPLIVPLLRISVFLCLIMSVMMFIERVYMGVVITLLKLFGRKPEKRYKWEPIKDDIELGNSCYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIIIQVLDDSTDPAIKELVQLECQRWASKGVNIKYEVRDNRNGYKAGALKEGMKHSYVKQCDHVAIFDADFQPEPDFLWRTVPFMVHNPEIGLIQARWKFVNSDECMMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLSNLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMVMEIIRNKKVSLWKKIHVIYSFFFVRKVVAHINTFVFYCIVLPATVLVPEVAVPKWGAVYIPSVITLLNAVGTPRSLHLLVFWILFENVMSLHRTKATVIGLLEASRVNEWIVTEKLGDALKAKAGTKALKKPRFRIEDRIHLLELGVGMYLFFIGCYDVMFGKNHFFIFLFIQAIAFFIMAFGYVGTYVPNY 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03444 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 97 374 IPR029044 -
Mepo3g03444 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 91 313 IPR029044 -
Mepo3g03444 534 Pfam Glycosyltransferase like family 2 99 333 - -
Mepo3g03444 534 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 23 529 - -
Mepo3g03444 534 FunFam Glucomannan 4-beta-mannosyltransferase 9 89 317 - -
Mepo3g03444 534 CDD CESA_CaSu_A2 98 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03444 Mepo-Chr3 44386667 44391858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03444 3 534 Miscellaneous Gene Families AT5G03760 80.675 0.0 931
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03444 K13680 - gmx:100782772 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03444 3 44386667 44391858 Mepo2g01752 2 25610737 25616670 ECH
Mepo3g03444 3 44386667 44391858 Mepo3g03444 3 44386667 44391858 ECH
Mepo3g03444 3 44386667 44391858 Mepo4g02437 4 32546721 32551518 PCT