Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02179 ATGAGCACTAGTTCTGAATATTTTGAGAAATTTACATGGAAAATTGAAGATTTCTCAAAAAAGAATTGCATGAAATTAAAGTCCAAAGATTTCAAAATCCGTGGTTATACATGGAAGATCCGTGTGCATCCACTAAGGAGGGATGTTGACCATTTTACATTGTATTTAATGGTTGCTGATTCTTTACCACCATATGGATGGGATAGAAACACCTTTTTCAAGTTAGTTCTAGTTAATCAGCTGGATAAGAACAAGAACATTGTAAAAGAGACTCAGCAAAAGTTCAATGGAGGATATAGAAGCTGGGGTGCATTTTTCCTAAATTTCAATAAATTTATTGACCATAAACAAGGGTATCTTGTGAGAGACACATGTATAATTGAAGCTCATATTTGTGTGTCTAACTTTGCACCAAAAATTCATGACATCAATTCCTTGAACCGAAATTCATCTCTAACAGATCAATCTTCAGATGAAAGGGAAACAATTAGTCCAAGAACATCAGGTTCAACATCTAGCCCAGATGAAGGAGAGATTCAAGGTTCAGATTTAACATTAAGACAATTTATAGATTTGGATGGTTTAAAACCCGAAGAAAAACGTTTTGTTCCATTTTTAGAGGAAGTTTGCACATGGCGTCCGTCTTTGATACAAAGTCAAATGAAAAAATCTCCTTTGTTTCGACAATGGGCGTTTATTTCATTAGGAAAAGTTCTGTATTTTCTTAAGACGAAGAAAGTGAAAGATATGAGCGAAGATGACATAAACAATCTTCAGAGTTTGTGGGAAGAACTAGAAAAATCTTCGGAATTCGACTTGAGTTGGTTAGAGCCTTATGTTCAATCTGCTTTAGGTGTGAAACCTTATTTGGAAAGAGCAAACAAAATGAAGAACTTAAAGGATAAAGTTGTTGCTTTGGAAATTAAAATGAAGATGCTTAGAGATGAATTGGCTGCTTCACAAGCAGAGTTTGAGGTTGCAAGGAAAGGCTTATCAGAAATCAGAAATGGTTTCCAAGAAATGAATGTTAATGCTTCAATAGGTTATGCTTTGTTTTAA 1059 0.3428 MSTSSEYFEKFTWKIEDFSKKNCMKLKSKDFKIRGYTWKIRVHPLRRDVDHFTLYLMVADSLPPYGWDRNTFFKLVLVNQLDKNKNIVKETQQKFNGGYRSWGAFFLNFNKFIDHKQGYLVRDTCIIEAHICVSNFAPKIHDINSLNRNSSLTDQSSDERETISPRTSGSTSSPDEGEIQGSDLTLRQFIDLDGLKPEEKRFVPFLEEVCTWRPSLIQSQMKKSPLFRQWAFISLGKVLYFLKTKKVKDMSEDDINNLQSLWEELEKSSEFDLSWLEPYVQSALGVKPYLERANKMKNLKDKVVALEIKMKMLRDELAASQAEFEVARKGLSEIRNGFQEMNVNASIGYALF 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02179 352 ProSiteProfiles MATH/TRAF domain profile. 8 131 IPR002083 GO:0005515
Mepo4g02179 352 Pfam MATH domain 16 131 IPR002083 GO:0005515
Mepo4g02179 352 MobiDBLite consensus disorder prediction 148 179 - -
Mepo4g02179 352 SUPERFAMILY TRAF domain-like 10 135 - -
Mepo4g02179 352 CDD MATH 10 131 IPR002083 GO:0005515
Mepo4g02179 352 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 7 145 IPR008974 GO:0005515
Mepo4g02179 352 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 8 325 - -
Mepo4g02179 352 Coils Coil 296 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02179 Mepo-Chr4 29401129 29403063 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02179 - - gmx:100797919 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02179 4 29401129 29403063 Mepo4g01697 4 22230418 22255723 ECH
Mepo4g02179 4 29401129 29403063 Mepo4g02179 4 29401129 29403063 ECH