LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo4g01029	ATGGTAGCATGTATCGACATGGCATTCTCCGTAGTTAATTCAACTTCTTCTTATCCATGTTTGTTCTCAAACTATTCTCCATTCTTCACCAACAATAGATTCCTAAGCTTGGGCTTGGGCCTGGGTTTTGAGTATCAAAGGAAAGGAAGAAGGATACTAATTAGGAGACATGTCAAGTTTGTTATCAGTGCACAGCTTTCCAAGTCATTTTCATTCACCTTCGGGCTTGATTCTCCGAATTTGAATTCCTTCCAATCCCATGATCTATCAAAGTTGTCCTGGAGGGGACCAGTTCCGGGTGATATTGCTGAAGTCGAGGCATATTGTAGGATCTTTAGGAACTCCGAAAGGCTTCATTCTGCATTAATGGATGCATTATGCAATCCGTTGACTGGGGAATGTAGCGTCTCGTATGAGGTTTCATCAGATGAGAAACCTCAACTTGAAGATAAAATAGTTTCTGTTCTTGGATGCATGGTATCCCTTGTGAACAAAGGCAGGGACGATGTTCTTACCGGAAGGTCCTCAATTATGAACCCCTTTCATGACGCAGAGATTAGCGAGATCGAGGATAAGCTCCCTCCACTTGCCGTTTTCAGAAGCGAGATGAAAAGGTGTTCTGAGAGTTTGCATGTTGCCCTACAGAATTATTTAACACCTGATGATGATCGGAGCTTAAACGTATGGAGGAAACTTCAGAAACTGAAGAATGTCTGCTATGATTCTGGTTTTCCTCGTGGTGAGGGTTATCCCTGCCCTACACTATTTGCTAATTGGTGTCCTGTATATTTTTCTTCTTCTAAAGAAGACACGGAATCTGAAGAATTAGAAACGGCTTTTTGGACTGGTGGTCAGGTAACAGAAGAAGGACTAACGTGGTTGCTAGATAAAGGATATAAAACGATTATAGATATCAGAGCCGAGATTGTAAGAGATAATTTCTATCAAGTGGCCGTGAACGATGCTATTTCATCTGGCAAAATTGATTTAGTAAAAATCCCAGTTGAGGTTATGACTGCACCAACAATGGAACAGGTTGCGAGGTTTGCATCTTATGTTTCAGATAGCAGCAAAAGGCCTATCTATCTTCATAGCAAGGAAGGAGTTTGGAGATCATCTGCCATGGTGTCCAGATGGAGGCAGTACATGACTCGCTCTTCGTCACAGAATGTTTCTAGTCCACCAACTACCCCCTCTAACAGGTTATCACAGTCTACAAATAGCTCCGCAAAACTGCAGGATTCTTCAGCGACTGCAGAAAGATCCTCCCTCGACAAGGATGTTACTTCATTGCAAGAAAGTTTTGATGCAACACGTAGTTCTGTTGGAACATCTGACAGAAGTGTCTCTGAAAAGAAGTATGATGAGAATACACAAGGTAATGGAGCCGTAAATGGAATTTCTCCTGACAAGGAAGGATCTTTCCCAAGTTTTTCCAGCAAGATTAACCCTTTAACAGCTCAAGTTCCTCCTCCTGATATCTTTTCCAAAAAAGTGATGTCCAAGTTTTTGGGTAGCAGGAAGATTTCACCTCCCGATTATGTCAATTATCAAATCAAAAGGGCGAAATTCTTACCGCAATTTAAGGACATGGCTATTGGAAGACGTGAAAGAGATGTGGTTGTTTCCAATGGTACTATTGTGGGCACTGATAGTTTAAATGGAGCAGCTCATGTTGATCATCCATCTGGAGAGCCCGAAATTACGGTCGATGACAATCAAAAGTCGGTGAATGGGAATACATCTAGTTCTAGTAGGACAACAGTAAACAAATTAAGTCAAGGGGAATTACATTACATGGCTAATGCCGACGTTTCCGCTGTTGTGAATAATAATAATAATAATAATAATGTAACAACTAAATCTCCAAGGGTTGAAAATGGAACGGTCAAGGCTGGGTTAGCTTTACGCGATGAAGAGTTGGGATCCCTTGAAGGCGATATGTGTGCGTCGTCAACGGGAGTTGTAAGGGTGCAGTCAAGAAAGAAAGCCGAGATGTTCTTGGTTCGGACAGATGGATTTTCTTGTACTAGAGAAAAGGTCACGGAATCTTCTTTGGCTTTCACTCATCCTAGCACTCAGCAACAGATGCTTATGTGGAAGTCTACACCAAAGAATGTGCTGTTGTTAAAAAAGCTTGGGGACGAACTATTGGAAGAAGCAAAAATGGTTGCTAATTTCCTACATCACCAAGAGAAAATGAATGTTATTGTGGAACCTGATGTGCATGATGTACTTGCCAGAATTCCAGGTTTTGGATTCGTGCAGACCTTTTATAGCCATGATACAAGTGATCTACACGAGAAAGTAGATTTTGTGGCTTGCTTGGGGGGAGACGGTGTTATACTGCATGCATCAAATCTGTTCAGAGATGCTGTTCCACCTATTGTATCATTTAACCTTGGTTCCCTTGGTTTTCTGACTTCTCATAGTTTCGACGACTACAGGCAAGACTTAAGACAAGTCATTCACGGAAATACTTCACGAGATGGTGTCTACATTACTCTTAGGATGCGTCTCCGATGTGAAATTTTTCGTAAAGGTAAAGCAATTCCAGGGAAAGTATTTGATATCCTCAATGAGGTGGTTGTTGATCGGGGTTCTAATCCATACCTTTCAAAGATTGAATGCTATGAACATGATCACCTTATAACCAAAGTACAAGGTGATGGAGTCATTGTTGGCACTCCCACGGGAAGTACTGCATATTCTACGGCTGCTGGAGGTTCCATGGTCCATCCAAACGTTCCGTGCATATTGTTTACCCCAATCTGTCCACATTCACTGTCATTTAGACCAGTCATACTTCCAGATTCTGCTCGATTAGAATTAAAGATTCCAGAAGATGCTAGAAGTAACGCGTGGGTCTCTTTCGATGGAAAAAGAAGACAACAGCTCTCAAGAGGAGACTCAGTCCGGATACATATGAGTGAGCATCCCCTTCCAACTGTTAACAAGTTTGACCAAACGGGTGATTGGTTCCGCAGCTTGATTCGCTGCCTAAATTGGAACGAGAGGCTTGATCAAAAGGCTCTATAA	3039	0.4195	MVACIDMAFSVVNSTSSYPCLFSNYSPFFTNNRFLSLGLGLGFEYQRKGRRILIRRHVKFVISAQLSKSFSFTFGLDSPNLNSFQSHDLSKLSWRGPVPGDIAEVEAYCRIFRNSERLHSALMDALCNPLTGECSVSYEVSSDEKPQLEDKIVSVLGCMVSLVNKGRDDVLTGRSSIMNPFHDAEISEIEDKLPPLAVFRSEMKRCSESLHVALQNYLTPDDDRSLNVWRKLQKLKNVCYDSGFPRGEGYPCPTLFANWCPVYFSSSKEDTESEELETAFWTGGQVTEEGLTWLLDKGYKTIIDIRAEIVRDNFYQVAVNDAISSGKIDLVKIPVEVMTAPTMEQVARFASYVSDSSKRPIYLHSKEGVWRSSAMVSRWRQYMTRSSSQNVSSPPTTPSNRLSQSTNSSAKLQDSSATAERSSLDKDVTSLQESFDATRSSVGTSDRSVSEKKYDENTQGNGAVNGISPDKEGSFPSFSSKINPLTAQVPPPDIFSKKVMSKFLGSRKISPPDYVNYQIKRAKFLPQFKDMAIGRRERDVVVSNGTIVGTDSLNGAAHVDHPSGEPEITVDDNQKSVNGNTSSSSRTTVNKLSQGELHYMANADVSAVVNNNNNNNNVTTKSPRVENGTVKAGLALRDEELGSLEGDMCASSTGVVRVQSRKKAEMFLVRTDGFSCTREKVTESSLAFTHPSTQQQMLMWKSTPKNVLLLKKLGDELLEEAKMVANFLHHQEKMNVIVEPDVHDVLARIPGFGFVQTFYSHDTSDLHEKVDFVACLGGDGVILHASNLFRDAVPPIVSFNLGSLGFLTSHSFDDYRQDLRQVIHGNTSRDGVYITLRMRLRCEIFRKGKAIPGKVFDILNEVVVDRGSNPYLSKIECYEHDHLITKVQGDGVIVGTPTGSTAYSTAAGGSMVHPNVPCILFTPICPHSLSFRPVILPDSARLELKIPEDARSNAWVSFDGKRRQQLSRGDSVRIHMSEHPLPTVNKFDQTGDWFRSLIRCLNWNERLDQKAL	1012

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo4g01029	1012	MobiDBLite	consensus disorder prediction	385	469	-	-
	Mepo4g01029	1012	Pfam	ATP-NAD kinase C-terminal domain	859	985	-	-
	Mepo4g01029	1012	PANTHER	NAD KINASE	331	1012	-	-
	Mepo4g01029	1012	Hamap	NAD kinase [nadK].	705	1003	IPR002504	GO:0003951\|GO:0006741
	Mepo4g01029	1012	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	280	382	IPR029021	-
	Mepo4g01029	1012	MobiDBLite	consensus disorder prediction	553	588	-	-
	Mepo4g01029	1012	SUPERFAMILY	NAD kinase/diacylglycerol kinase-like	709	1007	IPR016064	-
	Mepo4g01029	1012	Gene3D	Protein tyrosine phosphatase superfamily	269	407	IPR029021	-
	Mepo4g01029	1012	Gene3D	-	694	1004	IPR017438	-
	Mepo4g01029	1012	Pfam	ATP-NAD kinase N-terminal domain	744	826	IPR002504	GO:0003951\|GO:0006741
	Mepo4g01029	1012	MobiDBLite	consensus disorder prediction	385	445	-	-
	Mepo4g01029	1012	FunFam	NAD kinase 2, chloroplastic	694	856	-	-
	Mepo4g01029	1012	FunFam	NAD kinase 2, chloroplastic	839	979	-	-
	Mepo4g01029	1012	Gene3D	-	839	979	IPR017437	GO:0003951\|GO:0019674
	Mepo4g01029	1012	MobiDBLite	consensus disorder prediction	569	588	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo4g01029	Mepo-Chr4	13638201	13646343	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo4g01029	K00858		-	gmx:100820030	1541.17

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo4g01029	4	13638201	13646343	Mepo4g01029	4	13638201	13646343	ECH
	Mepo4g01029	4	13638201	13646343	Mepo3g06420	3	78227103	78234193	PCT