Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06420 ATGTTGGCATGTAATAGTTTCTGCGCTTGCCACGTGGCATTCTCCGACAATTCCACAATCCTCCTCCGGTTGAAGAAGCCTCAGCTCACTCTCCAAAGAACTACACACCTCGTTACCGCTGCTTCTTCTTCCTTTCATTTCGCTTTGGATTCTCAGAGCTTGAAGTCCATTGAATCCCATGATGCATCGCGGTTACCTTGGATTGGTCCAGTTCCAGGTGATATTGCTGAAGTGGAAGCATATTGTAGGATTTTTAGAAATTCTGAGACCCTTCATTCTGCATTAATGGATGCTTTATGTAACCCTTTTACTGGTGAATGTAGTGTTTCAGAAGATGTTCCATCCCACGAGAAACCTCTTTTAGAAGATAAAATTGTTTCTGTACTTGGATGTATGGTTGCTCTTGTAAAAAATGGGAGGGAGGATGTTCTTGCCGGAAGATTTTCCATTATGTCCCCCTCCCGTGCTTCTGGGGTTGGCTTGGTGGAGGAAAGCCTCCCTCCACTCGCTGTTTTCAGAGGCGAGATGAAAAGGTGTTGCGAGAGCTTGCATGTTGCTCTTGAGAACTATTTAATTCCTGGTGATGATCGAAGTTTGGATGTGTGGAGGAAAGTTCAGAGATTGAAGAATGTATGCTATGATTCCGGTTTTCTTCGTACAGAAGAGGATCCGTGTCCTACCCTATTTGCAAACTGGAGTCCAGTATATTTGTCCTGTTCCAAAGAGGACTCACTGTCCAATGAATCGGAAGTTGATTTTTGGACAGGTGGGCAGGTAACAGAAGAAGGCCTCAAGTGGCTTCTGGATAGAGGATATAAAACTATTGTGGATCTTAGAGAAGAGACTGTAAAAGATAATTTCTACCAAGCTGCTCTGAATGATGCTATTTCATCTGCAAGTATTGAATTGGTCAAAATTCCAGTTGAAGTTGGGACTGCGCCTAAAATGGAACAGGTTGAGAGGTTTGCATCTCTTGTTTCAGATAACAGCAGAAGGCCAATCTATCTGCACAGCAAAGAAGGAGTTTGGAGAACGTCTGCCATGGTTTCCAGATGGAGGGAATACATGGCTCACTCTGCATCGCCTGCATTGCAGTATGTTTCTAATCAAGCAGTTATTTCCAATGACATATTATCAGATTATACAAATGGGTCTGGGAATCTGCAGGACTTAAAGCCTGCTGAGAGATCCTCCCTTGAAAAAGATACTGCATTGTTGAAAGAGGGTTTAGGTGCAATACATAGTTTTGTTGACTCATTTGAATGTACCTCTCCAAATAAGAACAATGAAAAAACACAACGTAATGGGGCCTTAAGTGGAATTATTCCCAATGATAAGGCTTCATCACAAGATACTGCTGATGTTGGGGAAAGATATTTTCCTACTTTCTCCAGCAAAACCAACCCTTTAGACGCTCAAGTTCCACCTCAGGATGCCTTTTCCAAAAAAGAGATGTCCAGATTTTTAGGAAGTAAAAAGAGTTCAAAACCCTCTTGTTCCAGTAATCAGGTCAAAAGGTTGGGATGCTTGCAAGATTCAAGGAGCATCCATAATAGAAGACTGCAGGGGCAAGTGATTATCAACAGTGGTCATAATCCTGAACCTAAAATTGTGGGCCCAGCAGAAAGTTCCTATGGGTCTGTTCAGATTGCCGTTGGTAACAAATGGAAGTTAGCGAATATGAATTCTTCCAGTTCTGTTAGGACAACAGTTAATGCTTTTAGTGAAAGAGAAATGTATCGCATGACTGATGTCAATGATACTGATAATGCAACTAACTCTCAAAGGATTTTAACCGATGACGATAAGGTGAGGGAAGACTTGAGATTCACTGCAGGAGACATGTGTGCATCTTCAACTGGAGTTGTAAGGCTGCAGTCAAGAAAAAAAGCAGAGATGTTCCTAGTACGGACAGATGGATTTTGTTGTGTGAGAGAGAAGGTGACCGAATCTTCTTTGGCGTTCACGCATCCTAGCACTCAGCAACAAATGCTAATGTGGAAATCTACCCCAAAGACTGTGTTATTGTTGAAAAAGCCCGGGGAGCACCTCATGGAAGAAGCTAAAGAGGTTGCTTCTTTTCTATATAACCAAGAGAAAATGAACGTATTCGTGGAACCTGATGTGCATGATATATTTGCTAGAATTCCCGGATTTGGATTCATACAGACCTTCTATACTCAAGATGCCTGTGATCTACACGAGAAAGTAGATTTTGTGGCATGTTTAGGGGGAGATGGCGTTATATTGCATGCTTCAAATCTATTTATAGGTGCTGTTCCCCCTGTTGTGTCATTTAACCTTGGTTCCCTCGGTTTTCTGGCTTCTCACAGTTTTGAAGACTACAAGCAGGACCTACGACATGTCATCCACGGAAATAACAAACAAGATGGTGTATACATCACTCTCAGAATGCGTCTCCGATGTGAAATTTTCCGTAAGGGTAAAGCTGTGCCAGGGAAAGTATTTGATATTCTCAATGAAGTTGTTGTTGATCGGGGTTCAAATCCGTACCTTTCCAAGATTGAATGCTATGAACATGAGAGACTTATAACAAAGGTACAAGGTGATGGAGTGATCATAGCCACTCCTACCGGAAGCACTGCCTATTCTACAGCTGCTGGAGGTTCTATGGTCCATCCAAATGTTCCATGCATGCTGTTTACTCCAATCTGTCCACATTCACTCTCATTTAGACCAGTTATACTTCCAGATTCTGCTCAACTTGAATTAAAGATTCCAGAGGATGCTAGAAGCAATGCCTGGGTTTCATTTGATGGGAAGAAAAGGCAGCAGCTTTCAAGAGGAGATTCTATACGAATATCTATGAGTCAGCATCCTCTTCCAACAGTTAACAAGTTTGACCAAACAGGTGATTGGTTTCATAGCTTGATTCGATGCTTAAATTGGAATGAAAGACTTGACCAAAAGGCCCTATAA 2940 0.4204 MLACNSFCACHVAFSDNSTILLRLKKPQLTLQRTTHLVTAASSSFHFALDSQSLKSIESHDASRLPWIGPVPGDIAEVEAYCRIFRNSETLHSALMDALCNPFTGECSVSEDVPSHEKPLLEDKIVSVLGCMVALVKNGREDVLAGRFSIMSPSRASGVGLVEESLPPLAVFRGEMKRCCESLHVALENYLIPGDDRSLDVWRKVQRLKNVCYDSGFLRTEEDPCPTLFANWSPVYLSCSKEDSLSNESEVDFWTGGQVTEEGLKWLLDRGYKTIVDLREETVKDNFYQAALNDAISSASIELVKIPVEVGTAPKMEQVERFASLVSDNSRRPIYLHSKEGVWRTSAMVSRWREYMAHSASPALQYVSNQAVISNDILSDYTNGSGNLQDLKPAERSSLEKDTALLKEGLGAIHSFVDSFECTSPNKNNEKTQRNGALSGIIPNDKASSQDTADVGERYFPTFSSKTNPLDAQVPPQDAFSKKEMSRFLGSKKSSKPSCSSNQVKRLGCLQDSRSIHNRRLQGQVIINSGHNPEPKIVGPAESSYGSVQIAVGNKWKLANMNSSSSVRTTVNAFSEREMYRMTDVNDTDNATNSQRILTDDDKVREDLRFTAGDMCASSTGVVRLQSRKKAEMFLVRTDGFCCVREKVTESSLAFTHPSTQQQMLMWKSTPKTVLLLKKPGEHLMEEAKEVASFLYNQEKMNVFVEPDVHDIFARIPGFGFIQTFYTQDACDLHEKVDFVACLGGDGVILHASNLFIGAVPPVVSFNLGSLGFLASHSFEDYKQDLRHVIHGNNKQDGVYITLRMRLRCEIFRKGKAVPGKVFDILNEVVVDRGSNPYLSKIECYEHERLITKVQGDGVIIATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSAQLELKIPEDARSNAWVSFDGKKRQQLSRGDSIRISMSQHPLPTVNKFDQTGDWFHSLIRCLNWNERLDQKAL 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06420 979 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 253 371 IPR029021 -
Mepo3g06420 979 Gene3D - 661 971 IPR017438 -
Mepo3g06420 979 Pfam ATP-NAD kinase N-terminal domain 688 792 IPR002504 GO:0003951|GO:0006741
Mepo3g06420 979 MobiDBLite consensus disorder prediction 424 450 - -
Mepo3g06420 979 FunFam NAD kinase 2, chloroplastic 806 946 - -
Mepo3g06420 979 PANTHER NAD KINASE 293 979 - -
Mepo3g06420 979 Gene3D Protein tyrosine phosphatase superfamily 246 379 IPR029021 -
Mepo3g06420 979 FunFam NAD kinase 2, chloroplastic 661 824 - -
Mepo3g06420 979 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 674 974 IPR016064 -
Mepo3g06420 979 MobiDBLite consensus disorder prediction 424 452 - -
Mepo3g06420 979 Pfam ATP-NAD kinase C-terminal domain 826 952 - -
Mepo3g06420 979 Hamap NAD kinase [nadK]. 672 970 IPR002504 GO:0003951|GO:0006741
Mepo3g06420 979 Gene3D - 806 946 IPR017437 GO:0003951|GO:0019674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06420 Mepo-Chr3 78227103 78234193 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06420 K00858 - gmx:100796381 1445.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06420 3 78227103 78234193 Mepo3g06420 3 78227103 78234193 ECH
Mepo4g01029 4 13638201 13646343 Mepo3g06420 3 78227103 78234193 PCT