Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00889 ATGGATGGTCAACTTGGTATCATCAATGAAGAGGATGCTCACAACCCAAAATATACAGATGGATATTATTCGGTTGTTCCTTGCTTATTGAACAAGTTTCTTGAGTTGCATCCCCCAGATTCTTCAACCTTAGTATTAGAAGAAGCAGAAGGGAAAGCACAACTAAAGATAATTTCTATCAAAGCAGGAGGAATGATGTCACTATCTATTGACAATCTTGGTGCCCTATGGATGTGGGGAAACTGTCCACATCAAAGCAAAGAATGTATGTTCTCAATAGTAAGCAATTTCACTCCTACACCAGTTTGGGATTTCCATGGTCACACAGTAGTAAAAGTTGCATGTGGAAATGAACACATTATAGCACTAGTTAGTGTTGGAGAATCATACAATGGTGAAAATGATGATCTCATTTGTTACTCTTGGGGTAACAACAATCATGGTCAATTAGGCTTAGGGGACACGGACGATAGACCGAATCCAGAAATGGTAAAAACATTTGATCAAGATTCTCATTGGTCAATTTATGAAATAGCATGTGGTGCTTTTCACACTGCTTTGTTAACTCATAGAAAAAGGCCTAATGATGATACATTAGAAAGTGTGTGTTGGACATTTGGTCTTGGTGAAAATGGACAACTTGGTCATGGTACAACACAAAGTACATCAATTCCTGAACTTGTTCAAGAATTGCCACAATTTGTAAATCTTGTTTCTGTTGACTGTGGTTTGTTTCATACTTGTGTTGTGTCGTCGGATGGGGATGTTTGGTCGTGGGGAATGGAGAAGGGTCTTGGCTTGTATCCTGATGCGCGAGTTGTTGGTGAATATTCTAGCGATGCTCTTTCTCCGCTTATTGTAAGTAATCCTTATGAGGCCAAGTTTTTAGATCCGGTTCAAGTCGCATGTGGCGCGGCTCATACTATTATTGTTGCTCAAGAGGGATATAAAGTTTGGTCTTTGGGAAGAGGAAGAAGTGGTGTTCTTGGAAATGGTAATGTAGTAGATTGTTACATTCCCACTTTAGTGTTATGGCCTCCGTTGGTGGAAGATTTTCATTTCAAACAAGAGGAACCATCGAGTTTTCGCGAGCAAGATAAGGGAAAAGAAGAAGACTAA 1119 0.3959 MDGQLGIINEEDAHNPKYTDGYYSVVPCLLNKFLELHPPDSSTLVLEEAEGKAQLKIISIKAGGMMSLSIDNLGALWMWGNCPHQSKECMFSIVSNFTPTPVWDFHGHTVVKVACGNEHIIALVSVGESYNGENDDLICYSWGNNNHGQLGLGDTDDRPNPEMVKTFDQDSHWSIYEIACGAFHTALLTHRKRPNDDTLESVCWTFGLGENGQLGHGTTQSTSIPELVQELPQFVNLVSVDCGLFHTCVVSSDGDVWSWGMEKGLGLYPDARVVGEYSSDALSPLIVSNPYEAKFLDPVQVACGAAHTIIVAQEGYKVWSLGRGRSGVLGNGNVVDCYIPTLVLWPPLVEDFHFKQEEPSSFREQDKGKEED 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00889 372 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 178 188 IPR000408 -
Mepo4g00889 372 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 201 253 IPR000408 -
Mepo4g00889 372 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 74 126 IPR000408 -
Mepo4g00889 372 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 113 123 IPR000408 -
Mepo4g00889 372 PRINTS Chromosome condensation regulator RCC1 signature 203 217 IPR000408 -
Mepo4g00889 372 PRINTS Chromosome condensation regulator RCC1 signature 305 323 IPR000408 -
Mepo4g00889 372 PRINTS Chromosome condensation regulator RCC1 signature 57 70 IPR000408 -
Mepo4g00889 372 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 254 314 IPR000408 -
Mepo4g00889 372 SUPERFAMILY RCC1/BLIP-II 44 348 IPR009091 -
Mepo4g00889 372 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 3 344 - -
Mepo4g00889 372 Pfam Regulator of chromosome condensation (RCC1) repeat 253 310 IPR000408 -
Mepo4g00889 372 Pfam Regulator of chromosome condensation (RCC1) repeat 204 250 IPR000408 -
Mepo4g00889 372 Pfam Regulator of chromosome condensation (RCC1) repeat 140 188 IPR000408 -
Mepo4g00889 372 Gene3D - 2 359 IPR009091 -
Mepo4g00889 372 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 137 191 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00889 Mepo-Chr4 11526066 11527900 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00889 - - psat:127091439 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07626 3 89568686 89569950 Mepo4g00889 4 11526066 11527900 PCT