Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00625 ATGGCTTCCAACAAGCATAGTGCACTAATTATTTTATTTTCTCTCCTTGCTTATTCAACATTTTCAGATGCTTGTGGTTCATGCAAACCAACTCCAACAAGTCCTCCTCCACCTTCAACAACACCTAAGGCTAGCCCTCCACCTAAGGCTAGTACTCCACCTTCAACAACACCTATGGCTAGCCCTCCACCTAAAGCTAGTACTCCACCACCTTCGACAACACCTAAGTCTAGTCCTCCTACTCCTTCAACATCACAAAAATGCCCTAGTGACACATTAAAGCTAGGTGTTTGTGCTGATGTTCTAGGACTTGTTAATGTTATTGTTGGAAGTCCTGCTTCAAGCAAGTGTTGTACATTGATTCAAGGTTTGGCTGATTTGGACGCAGCAGTTTGTCTTTGTACCGCTATTAAGGCTAATGTTCTTGGTATCAACTTGAATGTGCCTGTCACACTTAGTCTCCTACTTAGTGCTTGTGAAAAATCTGTTCCTAATGGTTTCCAATGTTCATAG 513 0.423 MASNKHSALIILFSLLAYSTFSDACGSCKPTPTSPPPPSTTPKASPPPKASTPPSTTPMASPPPKASTPPPSTTPKSSPPTPSTSQKCPSDTLKLGVCADVLGLVNVIVGSPASSKCCTLIQGLADLDAAVCLCTAIKANVLGINLNVPVTLSLLLSACEKSVPNGFQCS 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00625 170 Gene3D - 85 170 IPR036312 -
Mepo4g00625 170 PANTHER - 6 169 - -
Mepo4g00625 170 Pfam Hydrophobic seed protein 88 170 IPR027923 -
Mepo4g00625 170 PRINTS Proline rich extensin signature 47 63 - -
Mepo4g00625 170 PRINTS Proline rich extensin signature 67 84 - -
Mepo4g00625 170 PRINTS Proline rich extensin signature 26 47 - -
Mepo4g00625 170 SMART aai_6 88 169 IPR016140 -
Mepo4g00625 170 MobiDBLite consensus disorder prediction 30 78 - -
Mepo4g00625 170 FunFam pEARLI1-like lipid transfer protein 1 86 170 - -
Mepo4g00625 170 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 91 169 IPR036312 -
Mepo4g00625 170 CDD HPS_like 86 169 IPR027923 -
Mepo4g00625 170 MobiDBLite consensus disorder prediction 26 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00625 Mepo-Chr4 8558527 8559039 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00625 78 169 Acyl Lipid Metabolism Gene Families AT4G22490 41.053 1.41e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00625 - - psat:127093350 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00625 4 8558527 8559039 Mepo4g00625 4 8558527 8559039 ECH
Mepo4g00625 4 8558527 8559039 Mepo3g07419 3 87582705 87583519 PCT