Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07419 ATGGCTTCCAACACCAAATTGATCTCTGCCACCATTTTAATACTTTCTCTCCTTGCTTACTCAACACTTACTGAGGCTAAGGGTTCATGCTCACCATCACCAAAGCCAAAGCCAAAACCTTCACCCCAAGGTCACTGCCCCAAAGATACCTTAAAATTAGGGGTTTGTGCTGATGTTTTAGGACTAGTTAATGTTGTAGTTGGGAATCCTGCTTCAGGTAGTAATTGTTGTGCATTAATCAAAGGTTTGGCTGATTTGGATGCTGCACTTTGTCTTTGCACTGCAATTAAGGCCAATGTGCTTGGAATAAACTTGAATGTACCTATCACCCTCACCTGGATCCTTGGTGCTTGTCAAAAAACAATCCCTCCTGGTTTTCAATGTGCCTAA 390 0.4231 MASNTKLISATILILSLLAYSTLTEAKGSCSPSPKPKPKPSPQGHCPKDTLKLGVCADVLGLVNVVVGNPASGSNCCALIKGLADLDAALCLCTAIKANVLGINLNVPITLTWILGACQKTIPPGFQCA 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07419 129 PANTHER - 9 128 - -
Mepo3g07419 129 CDD HPS_like 46 128 IPR027923 -
Mepo3g07419 129 SMART aai_6 46 128 IPR016140 -
Mepo3g07419 129 Pfam Hydrophobic seed protein 46 129 IPR027923 -
Mepo3g07419 129 Gene3D - 45 129 IPR036312 -
Mepo3g07419 129 FunFam pEARLI1-like lipid transfer protein 1 44 129 - -
Mepo3g07419 129 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 49 128 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07419 Mepo-Chr3 87582705 87583519 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07419 44 128 Acyl Lipid Metabolism Gene Families AT4G22490 37.647 2.16e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07419 - - gmx:100306307 142.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07419 3 87582705 87583519 Mepo3g07419 3 87582705 87583519 ECH
Mepo4g00625 4 8558527 8559039 Mepo3g07419 3 87582705 87583519 PCT