Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00611 ATGGATAATGGATATGTTGAGGGACTAGGCTTTGGCTCTACTCAAGCTTCTACCCTCTCTCTGGTGTTTTGCTCTTATGTTAGGGAGGATTCTTTATCTTCCAAATGCACTATTCTGAGACTGGAGTTTGATCACTATGATTACAAATCTCGAAAAACAATTTCAGCCAAGGACTTTGCACTCTCCATGGTTGCTTCTGCCGACATGAGTCATCTAGGCAAGTTGCTTGAACGGGTTGATGAACTGAATAATGAGCCATGCTTTAAGGATGTCCGCATCACATTTGAGGATTTCAAAAACTTTGCAGAGCTACGGAAAAATTTACTTCCATTATCATTAGCTCTTTTCAGTTTTGGAAAAGTAAATGGTCTGTTGACGAGAGATGATTTTCAGCGAGCAGCGTCACATGTTTGCGGCATATCTCTCTCGGACAACGTGGTTGAGATTGTTTTTCATTTGTTTGATACAAATCGAGACGGAAACCTAAGTACAGATGAGTTTGTCAGAGTGCTACACAAGCGAGAAAGGGACATTGGACATCCTGTGGAGACAGGAATGTTTGGTTTATTGTCTTGCTGCTGGAACTGTAAAGAAAACATCTCATCTTCACGGTTCTTTTCCTTATAG 627 0.4099 MDNGYVEGLGFGSTQASTLSLVFCSYVREDSLSSKCTILRLEFDHYDYKSRKTISAKDFALSMVASADMSHLGKLLERVDELNNEPCFKDVRITFEDFKNFAELRKNLLPLSLALFSFGKVNGLLTRDDFQRAASHVCGISLSDNVVEIVFHLFDTNRDGNLSTDEFVRVLHKRERDIGHPVETGMFGLLSCCWNCKENISSSRFFSL 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00611 208 ProSitePatterns EF-hand calcium-binding domain. 155 167 IPR018247 -
Mepo4g00611 208 ProSiteProfiles EF-hand calcium-binding domain profile. 142 177 IPR002048 GO:0005509
Mepo4g00611 208 SUPERFAMILY EF-hand 39 174 IPR011992 -
Mepo4g00611 208 Gene3D - 13 179 - -
Mepo4g00611 208 Pfam EF-hand domain pair 123 172 IPR002048 GO:0005509
Mepo4g00611 208 PANTHER EF HAND DOMAIN FAMILY A1,A2-RELATED 38 198 IPR039800 GO:0005509|GO:0006851
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00611 Mepo-Chr4 8317989 8319655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00611 38 139 EF-hand Containing Proteins AT4G32060 63.725 1.90e-37 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00611 K22827 - gmx:100806575 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00611 4 8317989 8319655 Mepo3g07405 3 87489518 87492130 PCT