Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07405 ATGCCATTGCCATTGCCATTACTATTACTATTACTATTACCATGTCTTTCTTTTCTACTCTCCGTCGATCCTCCTCCTTCATTCAACGTTTCCGAACTTCGACTTCACAGTTTTCTTCCTCCTCTCCGCCATCGTTACCGAATACCAACCCACAATATCCAAAATTCCTACAGAAGCAAGGTTTTCTTCAACTATGAGAAGCGCATACGATTACATAGTCCACCTGAGAAGGTTTTTGAATACTTTGCATCATATCGTTCACCGGAAGGGGAAGTTCTTATGAAACCGGCAGATTTAATGCGAGCAGTTGTTCCTGTTTTCCCTCCATCTGAATCCAACCTTGTTAGAGATGGATCCTTGAAAGGCGAAAGAAGTCCTGGCCACTTGTTCTGCCCTCCTTCAGAATTTTTTATGCTTTTCGATGTAAACGGTGACGGTCTTATATCTTTCAAAGAGTATTTATTCTTGGTAACATTGCTTAGCATCCCAGAATCAAATTTTTCTGCAGTATTTAAAATGTTTGACATGGATAATGATGGAGAGATAGATAAAGAAGAATTCAAGAGAGTGGTGGCATCAATGCGATCTCATAGCAGGCATGGTGTTCACCGAATGCATGAACAACAGACGGATGCTTCTGTAGAAAATGGTAGGATGGTGGAATACTTATTTGGTAAAGACGGAAAAGGACGCCTCAAACATGATAAATTTGCGAAGTTTATAAGAAATTTGCATGACGAAATTTTGAGGCTGGAGTTTGTTCATTATGACTACAAATCTCAAAAAACCATATCAGCTACGGATTTTGCACACTCCATAGTTGCTTCTGCAGACGTGGGTCATCTGAGCAAGTTACTTGAAAGGGTTGATGAATTAAACAATGATCCACAGTTCAATGACGTACACATTACATTTGAGGAGTTCAAAATTTTTGCAGAACTGAGGAAAAAATTAGTGCCACTATCATTGGCTCTATTCAGTTTTGCAAAAGTAAATGGCCTTTTAACAAGAGATGATTTTCAGCGAGCCGCATCAAGTGTTTGTGGTTTATCTCTTTCTGACAACGTGGTTGAGATTGTTTTCCATTTGTTTGACACAAGTGGGGATGGAAATCTAAGTTCAAATGAGTTTGTTAGAGTGCTACAGAGGCGTGAGAGAGATGTTGGTCGATCTGTGGAGACAGGAATCATGGGTTTCTTGTCATGCTGTTGGAACTGTACAGACACTTCCCCAGGTTCACAGTTGTTTTCCTGA 1254 0.4003 MPLPLPLLLLLLLPCLSFLLSVDPPPSFNVSELRLHSFLPPLRHRYRIPTHNIQNSYRSKVFFNYEKRIRLHSPPEKVFEYFASYRSPEGEVLMKPADLMRAVVPVFPPSESNLVRDGSLKGERSPGHLFCPPSEFFMLFDVNGDGLISFKEYLFLVTLLSIPESNFSAVFKMFDMDNDGEIDKEEFKRVVASMRSHSRHGVHRMHEQQTDASVENGRMVEYLFGKDGKGRLKHDKFAKFIRNLHDEILRLEFVHYDYKSQKTISATDFAHSIVASADVGHLSKLLERVDELNNDPQFNDVHITFEEFKIFAELRKKLVPLSLALFSFAKVNGLLTRDDFQRAASSVCGLSLSDNVVEIVFHLFDTSGDGNLSSNEFVRVLQRRERDVGRSVETGIMGFLSCCWNCTDTSPGSQLFS 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07405 417 ProSitePatterns EF-hand calcium-binding domain. 365 377 IPR018247 -
Mepo3g07405 417 ProSiteProfiles EF-hand calcium-binding domain profile. 352 387 IPR002048 GO:0005509
Mepo3g07405 417 Gene3D - 199 320 - -
Mepo3g07405 417 PANTHER EF HAND DOMAIN FAMILY A1,A2-RELATED 54 408 IPR039800 GO:0005509|GO:0006851
Mepo3g07405 417 CDD EFh_MICU 166 384 - -
Mepo3g07405 417 Gene3D - 325 394 - -
Mepo3g07405 417 Pfam EF hand 169 191 IPR002048 GO:0005509
Mepo3g07405 417 Pfam EF hand 136 153 IPR002048 GO:0005509
Mepo3g07405 417 Gene3D - 121 198 - -
Mepo3g07405 417 CDD EFh 135 192 IPR002048 GO:0005509
Mepo3g07405 417 SUPERFAMILY EF-hand 135 246 IPR011992 -
Mepo3g07405 417 Pfam EF-hand domain pair 333 384 IPR002048 GO:0005509
Mepo3g07405 417 ProSiteProfiles EF-hand calcium-binding domain profile. 162 197 IPR002048 GO:0005509
Mepo3g07405 417 SUPERFAMILY EF-hand 249 383 IPR011992 -
Mepo3g07405 417 SMART efh_1 356 384 IPR002048 GO:0005509
Mepo3g07405 417 SMART efh_1 132 160 IPR002048 GO:0005509
Mepo3g07405 417 SMART efh_1 166 194 IPR002048 GO:0005509
Mepo3g07405 417 ProSitePatterns EF-hand calcium-binding domain. 175 187 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07405 Mepo-Chr3 87489518 87492130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07405 16 349 EF-hand Containing Proteins AT4G32060 60.767 1.08e-137 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07405 K22827 - gmx:100786375 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07405 3 87489518 87492130 Mepo3g07405 3 87489518 87492130 ECH
Mepo4g00611 4 8317989 8319655 Mepo3g07405 3 87489518 87492130 PCT