Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06987 ATGGCGAGTCGAAGGAGTGTTTCGTCTCCTAGAAGAGCCTCTGAGTCTGGCGTCGGAAGAGGAGGACCTCGTAAATCAATTTCCTTACCACGCCCTATGGGTTTAACAGGAGAGCGGACAGTGAAGTCATTGCGTCTTTCAAAGGCTCTGACAGTACCTGAAACAACAACCGTATATGAAGCTTGTCGTCGGATGGCTGCCCGGAGGGTGGATGCTCTATTACTAACAGATTCTAACGGGTTGCTTTGCGGAATCCTCACAGACAAGGATATAGCAACAAAAGTTGTTGCTGAAGAGATTAATCCTGAAGACACACCTGTTTCCAAGGTTATGACAAGAAATCCGGTATTTGTCCTTTCTGAAACTCTTGCCGTGGAAGCCCTCCAAAAGATGGTGCAAGGGAAATTTAGGCATCTACCTGTGGTGGAGAATGGAGAAGTTTTGGCTTTACTCGACATAGCAAAGTGTTTGCACGATGCCACTGCACGTATGGAAAGGGCTGCAGAGAAAGGAAAAGCAATTGCAGCAGCTGTTGAAGGAGTTGAAAAACACTGGGGATCTTCTAATTCTGACTCTAATTCATCATTTGTTGAGGCCCTTCGGGAAAAGATATTCAAACCATCACTGTCCACAATCATTCATGAGAATTCAAAGATGGTAACAGTTGCACCAACAGACTCAGTTTTGAAAACAACAAAGAAGATGGTTGAACTTCATGCAGGTTGTGCCGTTGTGACTGTTGATGGCAAACCTCGAGGCATCGTTACTTCAAGAGATATCTTGATGCGGGTAGTTGCACAAAATCTTCCACCAGCATCAACTCCTGTTGAGAAGGTCATGACTCCAAATCCAGAATGTGTAATAATTGATACACCAATTGTCGATGCACTTCATACTATGCATGATGGAAAATTTTTACATCTTCCGGTGGTTGATAGAGATGGCATTGTAGTGGCTGTGGTCGACGTGATACATGTGACTCATGCTGCTGTGGCTACTGTTAGTCAGGTCGGAAACAACGAAGCTTCCACCACCTTGATGCAAAGGTTTTGGGATTCTGCCATGGCCTTACCTCCAAATGATGATGACGATGAAACACGAAGTGAGAGCTCCTTCAAAATAGGTTCTGATGGAGGAGAAACAGGGAGATCCATTCCTTATATTTCTGCAAGCATGCCCAATACATTTTCCTTCAAAGTACAAGATAAAAAGGGCAGAATGCATAGATTCACATGTGATACCCGGAGCATGACGGAGGTTATAAGTTCAATCCTTCAAAGACTTGGCACTGATATTGACCCTAACAATCTGCCCCAAATTCTGTATGAAGATGAAGACCATGATAAAGTTGTATTGGCTTCCGACAGTGATCTTGCCGCAGCTGTGGACCATGCAAGGACTGTTGGTTTGAAGGGATTGAAATTGTATTTAGACTATGAGGGAACACGTGGTCACAGGAAAGGTTCACGTTCGGGAAGTTTAGAGCATGCGTATTCAGATGCATGGGCCTCAGCATATAGTGGTGTTGCTGCCGGAGCTGCCCTTGTTGCTGGCTTAGGCCTTTTAACATACTTGAAGCGAGTTTGA 1587 0.4468 MASRRSVSSPRRASESGVGRGGPRKSISLPRPMGLTGERTVKSLRLSKALTVPETTTVYEACRRMAARRVDALLLTDSNGLLCGILTDKDIATKVVAEEINPEDTPVSKVMTRNPVFVLSETLAVEALQKMVQGKFRHLPVVENGEVLALLDIAKCLHDATARMERAAEKGKAIAAAVEGVEKHWGSSNSDSNSSFVEALREKIFKPSLSTIIHENSKMVTVAPTDSVLKTTKKMVELHAGCAVVTVDGKPRGIVTSRDILMRVVAQNLPPASTPVEKVMTPNPECVIIDTPIVDALHTMHDGKFLHLPVVDRDGIVVAVVDVIHVTHAAVATVSQVGNNEASTTLMQRFWDSAMALPPNDDDDETRSESSFKIGSDGGETGRSIPYISASMPNTFSFKVQDKKGRMHRFTCDTRSMTEVISSILQRLGTDIDPNNLPQILYEDEDHDKVVLASDSDLAAAVDHARTVGLKGLKLYLDYEGTRGHRKGSRSGSLEHAYSDAWASAYSGVAAGAALVAGLGLLTYLKRV 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06987 528 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 37 464 - -
Mepo3g06987 528 SUPERFAMILY CBS-domain pair 217 330 IPR046342 -
Mepo3g06987 528 MobiDBLite consensus disorder prediction 355 386 - -
Mepo3g06987 528 CDD PB1_MUG70 396 479 - -
Mepo3g06987 528 ProSiteProfiles CBS domain profile. 280 341 IPR000644 -
Mepo3g06987 528 Pfam CBS domain 216 263 IPR000644 -
Mepo3g06987 528 Pfam CBS domain 107 150 IPR000644 -
Mepo3g06987 528 Pfam CBS domain 47 95 IPR000644 -
Mepo3g06987 528 Pfam CBS domain 276 326 IPR000644 -
Mepo3g06987 528 SUPERFAMILY CAD & PB1 domains 389 482 - -
Mepo3g06987 528 CDD CBS_pair_MUG70_1 46 160 - -
Mepo3g06987 528 Pfam PB1 domain 395 478 IPR000270 GO:0005515
Mepo3g06987 528 SMART PB1_new 395 480 IPR000270 GO:0005515
Mepo3g06987 528 SUPERFAMILY CBS-domain pair 38 155 IPR046342 -
Mepo3g06987 528 ProSiteProfiles CBS domain profile. 45 103 IPR000644 -
Mepo3g06987 528 ProSiteProfiles CBS domain profile. 111 169 IPR000644 -
Mepo3g06987 528 SMART cbs_1 218 265 IPR000644 -
Mepo3g06987 528 SMART cbs_1 114 158 IPR000644 -
Mepo3g06987 528 SMART cbs_1 283 331 IPR000644 -
Mepo3g06987 528 SMART cbs_1 48 96 IPR000644 -
Mepo3g06987 528 ProSiteProfiles CBS domain profile. 215 271 IPR000644 -
Mepo3g06987 528 Gene3D - 186 342 IPR046342 -
Mepo3g06987 528 Gene3D - 34 176 IPR046342 -
Mepo3g06987 528 ProSiteProfiles PB1 domain profile. 393 480 IPR000270 GO:0005515
Mepo3g06987 528 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06987 Mepo-Chr3 83505271 83513282 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06987 - - gmx:100785816 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06987 3 83505271 83513282 Mepo3g06987 3 83505271 83513282 ECH
Mepo3g06987 3 83505271 83513282 Mepo2g04575 2 54197544 54202980 PCT