Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04575 ATGTCTCGAAAGAGTGGTTCGTTCTCAACTAGCCCTACTCGCTCAAGGAAGAAGACATCTGAGTTTTCACCTCCTCCTAGACCATTTCATCCTATGCGCCCCACAACCACGGGAGAGCGAACTGTGAAATCATTGCGACTTTCAAAGGCATTGACAGTGCCTGAAACAACAACGGTTTATGAAGCTTGTCGTCAAATGGCTGTTCGCAGAGTAGATGCTCTGTTACTAACTGATTCTAATGCTTTGCTCTGTGGAATCCTCACAGACAAGGATATATTAACAAGAGTTATTGCGCGTGAAGTTAATCTTGAAGACACACCTTGTTCCAAGGTTATGACAAGGAATCCAGTATTCGTCCTTACCGAAACTCTTGCCGTCGAAGCGCTCCAAAAGATGGTGCAAGGGAAATTCAGACATTTACCGGTAGTGGAGAATGGAGAAGTGGTTGCTATCCTTGACATAGCCAAGTGTTTATACGATGCCATTGCTCGTATGGAAAGGGCAGCTGAGAAAGGAAAGGCAATTGCAGCAGCTGTTGAAGGTATCGACAAACACTGGGGAGCATCTGCCTCTGGATCCAATTCATCATTCATTGAGACTCTTCGGGAGCAGATATTTAAGCCATCATTGTCTACAATCATTCCTGAGAATTCAAAGGTTGTTACAGTTTCACCAACAGATACAGTTTTGACAACAACAAAAAAGATGCTTGAACTTCATGGAAGTGCTGCTATTGTGACGATTGATAACAAACCTTGTGGTATCCTTACTTCAAAGGATATCTTGATGCGGGTTATTGCACAAAATCTCTCCGCATTGACAACTCTTGTTGAGACGGTCATGACTGCAAATCCAGAATGTGCAATAATTGATACACCAATTGTTGATGCGCTTCACATAATGCATAATGGAAAATTCTTGCATCTTCCTGTGGTTGATAGAGATGGCATTGTTGTTGCCACGGTTGATGTGATTAATATCACTCATGCTGCTGTGGCCACAGCTAGTCAGGTTGGGAATACTGCTAATCTTAACAATGAAACTGCCAACTCCATGATACAAAAGTTTTGGGATTCGGCCATGGCCTTAACTTCAAATGACGAAGAAGAAGATTCACAAAGCGACATTTCCTTGAAAATGATTTCTGAGGGAGGAGAAACAGGGAGATCCATTCCTTATAATGCGTCAAGCGTGCAGACCACATTTTCCTTCAAACTACAAGATAAGAAGGGTAGATTACATAGATTCACATGTGATACTCGGAGCTTGTCAGAGGTTATAACTTCCATCATTCAGAGAGTTGGCGATGATATCGATCCCAATAACCTGCCCCACATTTTGTATGAAGATGAAGAACACGATCAAGTTGTATTGGCTTCAGATAGTGATCTCGCTGCAGCCGTCGACCATGCAAAGACGTCTGGTCTGAAGGGATTGAGATTGCACTTAGACTACTCAGGAACGCATGGTTATGGAACAGAAGCAAGTTTAGGTTTGGAATATGCTGAGTCAGAAGCATGGGCCTCGGCCTATCATACCGTCGCAGCTGGAGCTGCAATTGTTGCTGCTTTAGGTCTATTAGCGTTCTTCAGGCTAAAGCCATGA 1605 0.433 MSRKSGSFSTSPTRSRKKTSEFSPPPRPFHPMRPTTTGERTVKSLRLSKALTVPETTTVYEACRQMAVRRVDALLLTDSNALLCGILTDKDILTRVIAREVNLEDTPCSKVMTRNPVFVLTETLAVEALQKMVQGKFRHLPVVENGEVVAILDIAKCLYDAIARMERAAEKGKAIAAAVEGIDKHWGASASGSNSSFIETLREQIFKPSLSTIIPENSKVVTVSPTDTVLTTTKKMLELHGSAAIVTIDNKPCGILTSKDILMRVIAQNLSALTTLVETVMTANPECAIIDTPIVDALHIMHNGKFLHLPVVDRDGIVVATVDVINITHAAVATASQVGNTANLNNETANSMIQKFWDSAMALTSNDEEEDSQSDISLKMISEGGETGRSIPYNASSVQTTFSFKLQDKKGRLHRFTCDTRSLSEVITSIIQRVGDDIDPNNLPHILYEDEEHDQVVLASDSDLAAAVDHAKTSGLKGLRLHLDYSGTHGYGTEASLGLEYAESEAWASAYHTVAAGAAIVAALGLLAFFRLKP 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04575 534 ProSiteProfiles CBS domain profile. 46 106 IPR000644 -
Mepo2g04575 534 ProSiteProfiles CBS domain profile. 281 338 IPR000644 -
Mepo2g04575 534 ProSiteProfiles PB1 domain profile. 399 486 IPR000270 GO:0005515
Mepo2g04575 534 SMART PB1_new 401 486 IPR000270 GO:0005515
Mepo2g04575 534 Gene3D - 189 343 IPR046342 -
Mepo2g04575 534 Gene3D - 32 177 IPR046342 -
Mepo2g04575 534 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 31 472 - -
Mepo2g04575 534 MobiDBLite consensus disorder prediction 1 41 - -
Mepo2g04575 534 MobiDBLite consensus disorder prediction 1 19 - -
Mepo2g04575 534 CDD PB1_MUG70 402 486 - -
Mepo2g04575 534 ProSiteProfiles CBS domain profile. 112 170 IPR000644 -
Mepo2g04575 534 SMART cbs_1 49 97 IPR000644 -
Mepo2g04575 534 SMART cbs_1 219 266 IPR000644 -
Mepo2g04575 534 SMART cbs_1 284 332 IPR000644 -
Mepo2g04575 534 SMART cbs_1 115 159 IPR000644 -
Mepo2g04575 534 ProSiteProfiles CBS domain profile. 213 273 IPR000644 -
Mepo2g04575 534 Pfam PB1 domain 401 484 IPR000270 GO:0005515
Mepo2g04575 534 Pfam CBS domain 277 322 IPR000644 -
Mepo2g04575 534 Pfam CBS domain 110 152 IPR000644 -
Mepo2g04575 534 Pfam CBS domain 217 263 IPR000644 -
Mepo2g04575 534 Pfam CBS domain 48 95 IPR000644 -
Mepo2g04575 534 CDD CBS_pair_MUG70_2 217 333 - -
Mepo2g04575 534 SUPERFAMILY CBS-domain pair 218 332 IPR046342 -
Mepo2g04575 534 SUPERFAMILY CBS-domain pair 39 155 IPR046342 -
Mepo2g04575 534 CDD CBS_pair_MUG70_1 47 163 - -
Mepo2g04575 534 SUPERFAMILY CAD & PB1 domains 396 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04575 Mepo-Chr2 54197544 54202980 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04575 - - gmx:100783514 794.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04575 2 54197544 54202980 Mepo2g04575 2 54197544 54202980 ECH
Mepo3g06987 3 83505271 83513282 Mepo2g04575 2 54197544 54202980 PCT