Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06939 ATGGAAACAGTGAACCCTGAGCCTGGGAATTCAGCATTGGATTCAAAACATGAATTGGCTAAAGAAGAAACCAAAGGGAAAACTCTTGTTCAAGATGATGGAGCTTTGAAGGATAGCACAGAAGCAGAACTCACCAAAATCAGCCTCATGAGAACTCTTGTTGAAAGCCGTGACCCTTCTTCTAAGGAAGTAGATGATTTGATGATTAGAAGATTCTTGAGAGCTCGTGATTTAGATGTAGATAAGGCTTCAGCTATGTTCCTAAAATACATGAAATGGAGAAAATCATTTGTTCCAAGTGGTTCCGTATCCCCTTCAGAGATAGCTGATGATCTTGCACAGGAAAAGATCTATGTTCAAGGAGTGGATAAGAAGGGTCGACCTATAAATGTTGCCTTTGCTGCGAAGCATTTTCAAAACAAACATGGTTTGGATGCATTCAAACGGTATGTAGTTTTCGCTCTTGAGAAACTAATTTCAAGGATGCCACCAGGGGAAGAAAAGTTTGTATCTATTGCAGACATTAAGGGATGGGGATATGCAAACAGCGACATTCGCGGTTACCTCGGTGCTCTAACCATTCTACAAGATTACTATCCAGAGAGATTGGGAAAGTTGTTCATAGTCCATGCACCTTACATGTTTATGAAAGTATGGAAAATTATTTACCCTTTCATTGATGACAATACCAAGAAGAAGATAGTATTTGTTGAGAACAAGAAGCTGAAAGCAACATTGCTTGAAGAGATTGATGAGAGTCAGCTCCCAGAGATATATGGAGGCAAACTTCCATTAGTTCCCATACAAGATTCTTGA 816 0.3958 METVNPEPGNSALDSKHELAKEETKGKTLVQDDGALKDSTEAELTKISLMRTLVESRDPSSKEVDDLMIRRFLRARDLDVDKASAMFLKYMKWRKSFVPSGSVSPSEIADDLAQEKIYVQGVDKKGRPINVAFAAKHFQNKHGLDAFKRYVVFALEKLISRMPPGEEKFVSIADIKGWGYANSDIRGYLGALTILQDYYPERLGKLFIVHAPYMFMKVWKIIYPFIDDNTKKKIVFVENKKLKATLLEEIDESQLPEIYGGKLPLVPIQDS 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06939 271 CDD SEC14 118 262 IPR001251 -
Mepo3g06939 271 PANTHER OS03G0850700 PROTEIN 37 270 - -
Mepo3g06939 271 SMART CRAL_TRIO_N_2 65 90 IPR011074 -
Mepo3g06939 271 SMART sec14_4 111 264 IPR001251 -
Mepo3g06939 271 Pfam CRAL/TRIO domain 115 261 IPR001251 -
Mepo3g06939 271 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 105 267 IPR001251 -
Mepo3g06939 271 Gene3D - 2 270 IPR036865 -
Mepo3g06939 271 MobiDBLite consensus disorder prediction 14 35 - -
Mepo3g06939 271 SUPERFAMILY CRAL/TRIO domain 107 264 IPR036865 -
Mepo3g06939 271 MobiDBLite consensus disorder prediction 1 35 - -
Mepo3g06939 271 SUPERFAMILY CRAL/TRIO N-terminal domain 35 99 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06939 Mepo-Chr3 83007577 83010027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06939 71 257 Acyl Lipid Metabolism Gene Families AT5G47730 28.079 3.75e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06939 - - gmx:100797666 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06939 3 83007577 83010027 Mepo3g06939 3 83007577 83010027 ECH
Mepo2g04522 2 53650756 53654236 Mepo3g06939 3 83007577 83010027 PCT