Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04522 ATGGAAGCAGTGAAGGGTTGTCACAAGGAATCAGAAGCAAAAACACAAGTTGTTGCAAATGATGTTGTCACAGAGACTGAACTAACCAAAATCCGTCTTGTGAGAGCCTTTGTTGAAACACAAGATCCATCTTCTAAGGAAGAAGATGATTTGATGATTAGAAGATTCTTACGAGCTCGTGATTTAGATGTGGAAAAGGCTTCAGCAATGTTCCTCAAGTACTTGAAATGGAGACATTCATTTGTTCCAAATGGTTCCATATCTCTATCACAGGTTCATAGTCAAATTGCAGACGACAAGGCCTTCGCCCAAGGACGCGACAGGATTGGTCGACCTATACTTATCGCTTTCGGTGGAAGACATTATCAAAAGAAAGACGGTCTAGATGAATTCAAACGTTTTGCAGTTTATATTCTTGATAAACTATGTGCAAGCATGCCACCTGGGCAAGAGAAATTTGTTGGTATAGCAGAACTCAAGGGATGGGGTTACTCAAATAGTGATGTGCGTGGATACATTGGTGCCCTCTCCATTTTGCAGGATTACTACCCTGAAAGATTGGGGAAGTTGTTTATTCTCCACGCGCCATACATTTTTATGAAAGTATGGAAAATAATTTATCCATTCATTGACAACAAAACTAAGAAGAAGATAGTATTTGTGGAGAATAATAAGCTGAAATCAACACTTCTAGAAGACATAGATGAAAGTCAACTCCCGGAGATATATGGTGGCAAACTGCAATTACTCCCCATCCAGGATATCTAA 768 0.3958 MEAVKGCHKESEAKTQVVANDVVTETELTKIRLVRAFVETQDPSSKEEDDLMIRRFLRARDLDVEKASAMFLKYLKWRHSFVPNGSISLSQVHSQIADDKAFAQGRDRIGRPILIAFGGRHYQKKDGLDEFKRFAVYILDKLCASMPPGQEKFVGIAELKGWGYSNSDVRGYIGALSILQDYYPERLGKLFILHAPYIFMKVWKIIYPFIDNKTKKKIVFVENNKLKSTLLEDIDESQLPEIYGGKLQLLPIQDI 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04522 255 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 105 251 IPR001251 -
Mepo2g04522 255 CDD SEC14 105 246 IPR001251 -
Mepo2g04522 255 Gene3D - 2 253 IPR036865 -
Mepo2g04522 255 PANTHER OS03G0850700 PROTEIN 22 254 - -
Mepo2g04522 255 SMART CRAL_TRIO_N_2 49 74 IPR011074 -
Mepo2g04522 255 SMART sec14_4 95 248 IPR001251 -
Mepo2g04522 255 Pfam CRAL/TRIO domain 100 245 IPR001251 -
Mepo2g04522 255 SUPERFAMILY CRAL/TRIO domain 99 248 IPR036865 -
Mepo2g04522 255 SUPERFAMILY CRAL/TRIO N-terminal domain 23 84 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04522 Mepo-Chr2 53650756 53654236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04522 55 241 Acyl Lipid Metabolism Gene Families AT5G47730 25.373 4.54e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04522 - - mtr:25501978 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04522 2 53650756 53654236 Mepo2g04522 2 53650756 53654236 ECH
Mepo2g04522 2 53650756 53654236 Mepo3g06939 3 83007577 83010027 PCT