Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06900 ATGGCTGAGGAATCTCCAAAGATAGCCACAACTCAAGAGGCCGTGCCTCTTGCTGAGGAGCAAGTGGTGGTCACTCAAAAAACAGAATCCACTGTTCCAGCTGACAAAGAATCTGATGAGCCCAGGCCCAAGCCTGAGCCCGAGCAAAACAACGCTACTGAGACTGAGACAGAGGAGGTATCAAAGCCCAGTGGTGATGACAAAATTCCAGAGTCTGGTTCGTTCAAGGAAGAGAGTACTATTGTTGGTGAGTTACCTGAAGCTGAGAAGAAAGCACTTACAGAGCTAAAACAGCTTATTCAAGAAGCACTTAACAAACATGAATTCTCTGCACCAGTTTCAACTACTCCAAACCCAGTTAAAGAACAAAAGCCCGAGCCCACACCAGAAGCAGAAGCACCTGCTGAAGAGACCAACAAGAAAGATGAACAGGTTTCTGAAACAGAATCTGTTGTTGCTGTTACTACTGCAGATGAAGAAGTATCAACACCACCACCACCAACAACAACTACTGAAGCTGAACAACCAAAAGAAGAAGCAGAAAAGAAAGAAACAGTGGTTGCTGCTTCTTCTGTAGATGAAGATGGAGCAAAAACAGTTGAAGCAATTGAAGAATCTGTTGTAGCTGTAGCTTCATCATCAGTTCCAGAGGAACCAAAGGCGGTGGAAGCTTCTTCACCGGAACAACAACCAGAAGAGGTTTCAATATGGGGAATACCACTCCTCGCAGACGATAGAACCGACGTGATTCTGTTGAAGTTTCTCCGTGCCAGAGACTTCAAAGTGAAAGAAGCATTCACAATGATCAAGAACACTATACGTTGGAGAAAAGAGTTCAAAATCCAAGAGTTATTATTGGATGAAAACTTAGGTGATGAATATTTAGAGAAAACTGTTTACATGCATGGCTATGACAAAGAAGGACACCCTGTTTGTTATAATATTTATGGAGAGTTTGATAACAAGGAGGTTTATAAGAAAACATTTTCTGATGAAGAGAAGAGAGAAAGGTTCTTGAAATGGAGAATTCTGGTCTTGGAGAAGAGTATAAGGAAATTGGATTTTACCCCTGGTGGTATATGCACTATTGTTCAAGTTAATGATCTTAAGAATTCTCCTGGACCTACCAAATGGGAGCTTAGACAAGCTACCAAACAAGCCCTTCAATTGCTTCAAGATAATTATCCTGAATTTGTAGCCAAACAGGTGTTTATCAATGTGCCATGGTGGTACTTAGCTGTGAACAGGATGATAAGTCCTTTTCTTACACAAAGAACAAAAAGCAAGTTTGTATTTGCTGGACCTTCCAAATCAGCTGAAACTCTTCTAAGTTACATAGCTCCTGAGCAACTTTCAGTCAAATATGGTGGACTAAGCAAAGATGGTGAATTTGGAATTGCTGATGCTGTTACAGAAATTACAGTGAGGCCTGCGGCAAAACACACCGTGGAATTTCCAGTTACTGAGAACTGTCTACTCTCTTGGGAGCTAAGAGTAATTGGGTGGGACATAAGCTATGGTGCAGAGTTTGTACCAAGTTCAGAAGGAAGCTACACTGTGATAATCCAGAAGACTAGAAAAGTTGCTTCATCAGAAGAACCAGTGCTTTGCAACAACTACAAAATTGGTGAACCTGGGAAAGTTGTTCTCACCATTGACAATTCAAGCTCTAAGAAGAAGAAGCTCTTGTACCGCTTGAAGACCAAGCCTTCAACTTCTGATTAA 1725 0.4151 MAEESPKIATTQEAVPLAEEQVVVTQKTESTVPADKESDEPRPKPEPEQNNATETETEEVSKPSGDDKIPESGSFKEESTIVGELPEAEKKALTELKQLIQEALNKHEFSAPVSTTPNPVKEQKPEPTPEAEAPAEETNKKDEQVSETESVVAVTTADEEVSTPPPPTTTTEAEQPKEEAEKKETVVAASSVDEDGAKTVEAIEESVVAVASSSVPEEPKAVEASSPEQQPEEVSIWGIPLLADDRTDVILLKFLRARDFKVKEAFTMIKNTIRWRKEFKIQELLLDENLGDEYLEKTVYMHGYDKEGHPVCYNIYGEFDNKEVYKKTFSDEEKRERFLKWRILVLEKSIRKLDFTPGGICTIVQVNDLKNSPGPTKWELRQATKQALQLLQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPSKSAETLLSYIAPEQLSVKYGGLSKDGEFGIADAVTEITVRPAAKHTVEFPVTENCLLSWELRVIGWDISYGAEFVPSSEGSYTVIIQKTRKVASSEEPVLCNNYKIGEPGKVVLTIDNSSSKKKKLLYRLKTKPSTSD 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06900 574 MobiDBLite consensus disorder prediction 59 74 - -
Mepo3g06900 574 SUPERFAMILY CRAL/TRIO domain 298 460 IPR036865 -
Mepo3g06900 574 MobiDBLite consensus disorder prediction 148 168 - -
Mepo3g06900 574 Pfam CRAL/TRIO, N-terminal domain 228 271 IPR011074 -
Mepo3g06900 574 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 468 568 IPR036598 -
Mepo3g06900 574 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 287 463 IPR001251 -
Mepo3g06900 574 PANTHER PATELLIN-1 39 571 IPR044834 GO:0008289
Mepo3g06900 574 SMART CRAL_TRIO_N_2 247 272 IPR011074 -
Mepo3g06900 574 MobiDBLite consensus disorder prediction 1 83 - -
Mepo3g06900 574 PRINTS Cellular retinaldehyde-binding protein signature 415 434 - -
Mepo3g06900 574 PRINTS Cellular retinaldehyde-binding protein signature 250 272 - -
Mepo3g06900 574 ProSiteProfiles GOLD domain profile. 467 568 IPR009038 -
Mepo3g06900 574 SUPERFAMILY CRAL/TRIO N-terminal domain 74 287 IPR036273 -
Mepo3g06900 574 MobiDBLite consensus disorder prediction 107 192 - -
Mepo3g06900 574 MobiDBLite consensus disorder prediction 125 147 - -
Mepo3g06900 574 Gene3D - 216 473 IPR036865 -
Mepo3g06900 574 MobiDBLite consensus disorder prediction 174 189 - -
Mepo3g06900 574 SMART sec14_4 293 460 IPR001251 -
Mepo3g06900 574 Gene3D GOLD domain 474 568 - -
Mepo3g06900 574 CDD SEC14 295 458 IPR001251 -
Mepo3g06900 574 MobiDBLite consensus disorder prediction 32 51 - -
Mepo3g06900 574 Pfam CRAL/TRIO domain 298 457 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06900 Mepo-Chr3 82694965 82698270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06900 251 437 Acyl Lipid Metabolism Gene Families AT5G47730 30.151 1.85e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06900 - - gmx:100805585 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06900 3 82694965 82698270 Mepo3g06900 3 82694965 82698270 ECH
Mepo2g04496 2 53411179 53414293 Mepo3g06900 3 82694965 82698270 PCT