Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04496 ATGTCTCACGATGACTCTGCAAACCAAACATCACCACATGTTGTTGAGGAAGTTGTTGTTACTCATGTAAATGTTCCACAACCTGAAAAAACAGCTACTATTCCCTTAGAGTCAGAGCAAGAAGATTCATACCCTGATGAACCCAAGAAGAAAAACAACCCCTTTGTTGAAACCGTCACTCTTGAAACTCATCTCTCCAAACCTAATACCGAAGAAGAAACTTTAATTAAAGAAGAAACCACCAAACCTTCTCATCTTGCAGACAATGAAAACAAGTCACTGCAAGAGCTTAAAAATCTCATTCAAGAAGCACTCAATAACCATGCCTTCTCTGCTCCACCACTCATAAAAGAAGAAAAACAATCCACCACCACCAACAACACCACCGTAGCTGCTGCGCCTGAAAAAGAACAGGTTTCTGATGCCACCCCACCAGAAGAACCTGCACAAGAAAACAAAGACCACAAAGTTGCAACGAAGAAAGACGAAGAAGAAGATAAGAAGGAAGAAGAAGTGAAGGAAAATGTAGTATCTTCTGTGGAGGATGATGGAGCAAAAACTGTGGAGGCTATTGAAGAAAGCGTTGTTGCTGTTTCTGCCTCTGTTCCTGCAGAGCAAGAACCTGTTGTAGAGAAAGTTGAAGCATCATTGCCATTACCACCTGAAGAAGTATCCATTTATGGGATACCTCTTCTTGCAGACAAAAGAAGTGACGTAATTCTGTTGAAATTTCTGCGTGCAAGAGATTTCAAGGTGAAAGAGGCTTTCACAATGATCAAGAACACAATTCTCTGGAGAAAAGAATTTGGAATAGAGGAGTTAATGGATGAGAAATTAGGTGATGAATTGGAGAAAGTGGTTTACATGCATGGATTTGATAAGGAAGGTCACCCTGTATGTTATAACATATACGGTGAATTTCAGAATAAGGAATTGTATAAGAAAACTTTTTCTGATGAGGAAAAGAGACATAATTTCCTTAAATGGAGAATTCAGTTCCTTGAGAAGAGCATTAGGAATTTGGATTTTAACCATGGTGGTGTATGCACTATTGTTCATGTCAATGATCTTAAGGATTCTCCTGGACCTGGTAAATGGGAACTTAGACAAGCTACCAGACAAGCCCTTCAATTGTTTCAGGACAATTACCCTGAATTTGTGGCCAAACAGGTGTTCATCAATGTGCCATGGTGGTACTTGGCAGTGAATAGGATGATAAGCCCTTTTCTTACCCAGAGAACCAAAAGCAAGTTTGTCTTTGCTGGGCCTTCCAAGTCAACTGAGACCCTTTTGAGCTACATAGCTCCAGAGCAACTCCCTGTGAAGTATGGTGGATTGAGTAAAGATGGTGAATTTGAAAATTCAGATTCTGTTACTGAGATCACAATAAGGCCAGCATCAAAACATACTGTAGAATTTCCTGTTACTGAGAAATGTTTACTATCTTGGGAGGTGAGAGTAATAGGGTGGGAAGTAAGGTATGGTGCAGAATTTGTACCAAGCAATGAAGGAAGCTATACTGTTATTGTCCAAAAGGCTAGAAAAGTGGCTTCATCAGAAGAAGCAGTGCTTTGCAACAGTTTTAAAATTAGTGAACCTGGTAAAGTTGTTCTTACCATTGACAACACAAGTTCTAGGAAGAAAAAGCTCTTGTACCGCTTGAAGACCAAGTCTTCACTCTCTGACTGA 1689 0.3996 MSHDDSANQTSPHVVEEVVVTHVNVPQPEKTATIPLESEQEDSYPDEPKKKNNPFVETVTLETHLSKPNTEEETLIKEETTKPSHLADNENKSLQELKNLIQEALNNHAFSAPPLIKEEKQSTTTNNTTVAAAPEKEQVSDATPPEEPAQENKDHKVATKKDEEEDKKEEEVKENVVSSVEDDGAKTVEAIEESVVAVSASVPAEQEPVVEKVEASLPLPPEEVSIYGIPLLADKRSDVILLKFLRARDFKVKEAFTMIKNTILWRKEFGIEELMDEKLGDELEKVVYMHGFDKEGHPVCYNIYGEFQNKELYKKTFSDEEKRHNFLKWRIQFLEKSIRNLDFNHGGVCTIVHVNDLKDSPGPGKWELRQATRQALQLFQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPSKSTETLLSYIAPEQLPVKYGGLSKDGEFENSDSVTEITIRPASKHTVEFPVTEKCLLSWEVRVIGWEVRYGAEFVPSNEGSYTVIVQKARKVASSEEAVLCNSFKISEPGKVVLTIDNTSSRKKKLLYRLKTKSSLSD 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04496 562 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 276 451 IPR001251 -
Mepo2g04496 562 MobiDBLite consensus disorder prediction 147 181 - -
Mepo2g04496 562 Gene3D GOLD domain 460 556 - -
Mepo2g04496 562 MobiDBLite consensus disorder prediction 24 94 - -
Mepo2g04496 562 PANTHER PATELLIN-1 46 559 IPR044834 GO:0008289
Mepo2g04496 562 MobiDBLite consensus disorder prediction 66 92 - -
Mepo2g04496 562 PRINTS Cellular retinaldehyde-binding protein signature 403 422 - -
Mepo2g04496 562 PRINTS Cellular retinaldehyde-binding protein signature 240 262 - -
Mepo2g04496 562 MobiDBLite consensus disorder prediction 113 181 - -
Mepo2g04496 562 CDD SEC14 282 446 IPR001251 -
Mepo2g04496 562 SMART CRAL_TRIO_N_2 237 262 IPR011074 -
Mepo2g04496 562 Coils Coil 87 107 - -
Mepo2g04496 562 MobiDBLite consensus disorder prediction 117 134 - -
Mepo2g04496 562 Pfam CRAL/TRIO, N-terminal domain 235 261 IPR011074 -
Mepo2g04496 562 Gene3D - 210 268 - -
Mepo2g04496 562 SUPERFAMILY CRAL/TRIO N-terminal domain 86 277 IPR036273 -
Mepo2g04496 562 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 456 555 IPR036598 -
Mepo2g04496 562 Gene3D - 270 459 IPR036865 -
Mepo2g04496 562 SMART sec14_4 281 448 IPR001251 -
Mepo2g04496 562 Pfam CRAL/TRIO domain 285 445 IPR001251 -
Mepo2g04496 562 SUPERFAMILY CRAL/TRIO domain 286 448 IPR036865 -
Mepo2g04496 562 ProSiteProfiles GOLD domain profile. 455 556 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04496 Mepo-Chr2 53411179 53414293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04496 241 440 Acyl Lipid Metabolism Gene Families AT1G55840 27.570 1.83e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04496 - - gmx:100788197 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04496 2 53411179 53414293 Mepo2g04496 2 53411179 53414293 ECH
Mepo2g04496 2 53411179 53414293 Mepo3g06900 3 82694965 82698270 PCT